WormBase Tree Display for Gene: WBGene00018610

WBGene00018610 SMap: S_parent: Sequence: F48E8
  Identity: Version: 1
    Name: Sequence_name: F48E8.3
      Molecular_name: F48E8.3
        F48E8.3.1
        CE36546
        F48E8.3.2
      Other_name: CELE_F48E8.3 Accession_evidence: NDB BX284603
      Public_name: F48E8.3
    DB_info: Database: AceView gene 3G553
        WormQTL gene WBGene00018610
        WormFlux gene WBGene00018610
        NDB locus_tag CELE_F48E8.3
        Panther gene CAEEL|WormBase=WBGene00018610|UniProtKB=Q09567
          family PTHR43400
        NCBI gene 175751
        RefSeq protein NM_065763.8
        TREEFAM TREEFAM_ID TF316142
        TrEMBL UniProtAcc Q09567
        UniProt_GCRP UniProtAcc Q09567
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (45)
    RNASeq_FPKM (74)
    GO_annotation: 00054778
      00123701
      00123702
    Contained_in_operon: CEOP3304
    Ortholog (33)
    Paralog: WBGene00015391 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016392 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: F48E8.3 encodes a fumarate reductase; by homology, the product of F48E8.3 is predicted to catalyze the irreversible conversion of fumarate to succinate. Curator_confirmed: WBPerson1843
          Date_last_updated: 26 Oct 2011 00:00:00
      Automated_description: Predicted to enable FMN binding activity and oxidoreductase activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F48E8.3
    Corresponding_transcript: F48E8.3.1
      F48E8.3.2
    Other_sequence (107)
    Associated_feature: WBsf034282
      WBsf992393
      WBsf992394
      WBsf1014886
      WBsf1014887
      WBsf224927
      WBsf224928
      WBsf224929
  Experimental_info: RNAi_result (21)
    Expr_pattern: Chronogram1557
      Expr6113
      Expr1012448
      Expr1038010
      Expr1151584
      Expr2003889
      Expr2022112
    Drives_construct: WBCnstr00002659
    Microarray_results (21)
    Expression_cluster: WBPaper00027022:tax-6(jh107)_downregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037086:biotin_regulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038289:oocyte_protein
      WBPaper00044736:flat_dev_expression
      WBPaper00044746:aging_upregulated_HeatShock
      WBPaper00045521:Gender_Neutral
      WBPaper00045729:gld-2(RNAi)_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050412:cco-1(RNAi)_upregulated_N2
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053615:SMO-1_target
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
      WBPaper00056826:SGP_biased
      WBPaper00057288:Cold_downregulated_protein
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00059027:neuron-synapses_enriched
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061274:microgravity_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:C32F10.4-D1086.2
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064130:Beta-Amyloid_upregulated_protein
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00005124:progesterone_10-7M_regulated
      WBPaper00025032:cluster_53
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00027342:alpha-Synuclein(A53T)_downregulated
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp4
      WBPaper00034739:N2lessDR1350
      WBPaper00035227:heat_shock_regulated
      WBPaper00041207:CE_dauer_up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00050538:Fasting_upregulated
      WBPaper00050538:Fasting_upregulated_cholesterol-dependent
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:cluster_3
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(186_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    Interaction (75)
  Map_info: Positive: Positive_clone: F48E8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.64538
  Reference: WBPaper00019498
    WBPaper00026800
    WBPaper00026805
    WBPaper00027145
    WBPaper00029292
    WBPaper00030963
    WBPaper00031006
    WBPaper00031648
    WBPaper00040490
    WBPaper00042090
  Method: Gene