WormBase Tree Display for Gene: WBGene00018560

WBGene00018560 SMap: S_parent: Sequence: F47D12
  Identity: Version: 1
    Name: Sequence_name: F47D12.3
      Molecular_name: F47D12.3
        F47D12.3.1
        CE01947
      Other_name: CELE_F47D12.3 Accession_evidence: NDB BX284603
      Public_name: F47D12.3
    DB_info: Database: AceView gene 3H389
        WormQTL gene WBGene00018560
        WormFlux gene WBGene00018560
        NDB locus_tag CELE_F47D12.3
        NCBI gene 185932
        RefSeq protein NM_065980.3
        SwissProt UniProtAcc Q09389
        UniProt_GCRP UniProtAcc Q09389
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00832804
      WBVar00832805
      WBVar00832806
      WBVar01500260
      WBVar01952263
      WBVar01566642
      WBVar00254066
      WBVar00399566
      WBVar00399567
    RNASeq_FPKM (74)
    GO_annotation: 00123674
    Ortholog (22)
    Structured_description: Automated_description: Predicted to be involved in protein homooligomerization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F47D12.3
    Corresponding_transcript: F47D12.3.1
    Other_sequence (11)
    Associated_feature: WBsf992704
      WBsf992705
      WBsf1015062
      WBsf1015063
  Experimental_info: RNAi_result: WBRNAi00015186 Inferred_automatically: RNAi_primary
      WBRNAi00047646 Inferred_automatically: RNAi_primary
      WBRNAi00005681 Inferred_automatically: RNAi_primary
      WBRNAi00032436 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027805
      Expr1151486
      Expr2003850
      Expr2022073
    Drives_construct: WBCnstr00026420
    Construct_product: WBCnstr00026420
    Microarray_results (20)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00037950:A-class-motor-neurons_CoreEnriched
      WBPaper00037950:A-class-motor-neurons_embryo_enriched
      WBPaper00037950:A-class-motor-neurons_embryo_SelectivelyEnriched
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:A-class-motor-neurons_larva_SelectivelyEnriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:all-neurons_larva_SelectivelyEnriched
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
      WBPaper00037950:GABAergic-motor-neurons_embryo_SelectivelyEnriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00037950:glr-1(+)-neurons_larva_SelectivelyEnriched
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055648:male-vas-deferens_expressed
      WBPaper00056619:CEPsh_enriched
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059253:sucrose_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
      WBPaper00061040:eat-2(ad1116)_upregulated
      WBPaper00061340:AUA
      WBPaper00061340:AVG
      WBPaper00061340:DA
      WBPaper00061340:DA_DB
      WBPaper00061340:DB
      WBPaper00061340:RID
      WBPaper00061340:SMB
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:sol-1-jnk-1_18695
      WBPaper00061651:AS_enriched
      WBPaper00061651:BDU_enriched
      WBPaper00061651:DA9_enriched
      WBPaper00061651:DA_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DB_enriched
      WBPaper00061651:PDB_enriched
      WBPaper00061651:PVR_enriched
      WBPaper00061651:RME_DV_enriched
      WBPaper00061651:URB_enriched
      WBPaper00061651:VA12_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062672:dcp-66(RNAi)_upregulated
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064494:postdauer_downregulated_WholeAnimal
      WBPaper00064716:paraquat_downregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065392:Lb.reuteri_upregulated
      WBPaper00065623:33
      WBPaper00065623:128
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:6_0
      WBPaper00065841:6_1
      WBPaper00065841:6_2
      WBPaper00065841:6_3
      WBPaper00065841:14_0
      WBPaper00065841:14_1
      WBPaper00065841:14_2
      WBPaper00065841:74_0
      WBPaper00065841:76_0
      WBPaper00065841:80_0
      WBPaper00065841:109_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066005:RAGA-1_degradation_somatic_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_19
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_A_Class
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00032948:FedUp
      WBPaper00036286:Pattern_I
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040876:mir-35_downregulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042258:DA1877_upregulated_GravidAdult
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(83_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    Interaction: WBInteraction000544089
      WBInteraction000547450
      WBInteraction000548129
      WBInteraction000551048
  Map_info: Positive: Positive_clone: F47D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.40035
  Method: Gene