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WormBase Tree Display for Gene: WBGene00018518

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Name Class

WBGene00018518SMapS_parentSequenceF46H5
IdentityVersion1
NameSequence_nameF46H5.2
Molecular_name (12)
Other_nameCELE_F46H5.2Accession_evidenceNDBBX284606
Public_nameF46H5.2
DB_infoDatabaseAceViewgeneXH885
WormQTLgeneWBGene00018518
WormFluxgeneWBGene00018518
NDBlocus_tagCELE_F46H5.2
PanthergeneCAEEL|WormBase=WBGene00018518|UniProtKB=Q20490
familyPTHR22227
NCBIgene180989
RefSeqproteinNM_001375063.2
NM_001029504.8
NM_001392800.1
TREEFAMTREEFAM_IDTF319884
TrEMBLUniProtAccQ7Z1R2
Q7Z1R1
Q20490
UniProt_GCRPUniProtAccQ20490
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00047936
WBVar01159683
WBVar01159684
WBVar01159685
WBVar01159686
WBVar00599130
WBVar00047941
WBVar00599131
WBVar01159687
WBVar01159688
WBVar00599132
WBVar00599133
WBVar01159689
WBVar01159690
WBVar01159691
WBVar01159692
WBVar01159693
WBVar00080354
WBVar01469673
WBVar01469674
WBVar01499933
WBVar01499934
WBVar01499935
WBVar01499760
WBVar01499761
WBVar00508046
WBVar00508047
WBVar00508048
WBVar00508049
WBVar00508050
WBVar00508051
WBVar00508052
WBVar00508053
WBVar00508054
WBVar00274341
WBVar01815931
WBVar01758719
WBVar01758720
WBVar01883212
WBVar01883213
WBVar01883214
WBVar01883215
WBVar01883216
WBVar01883217
WBVar01883218
WBVar01883219
WBVar02080428
WBVar02139557
WBVar01499867
WBVar01499868
WBVar01499685
WBVar01159677
WBVar01159678
WBVar01159679
WBVar01159680
WBVar00047931
WBVar01159681
WBVar01500067
WBVar01159682
RNASeq_FPKM (74)
GO_annotation00068290
00068291
00123632
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable kinase activity and protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in phosphorylation. Is an ortholog of human PABIR1 (PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF46H5.2a
F46H5.2b
F46H5.2c
Corresponding_transcriptF46H5.2a.1
F46H5.2a.2
F46H5.2b.1
F46H5.2c.1
F46H5.2c.2
F46H5.2c.3
Other_sequenceCR11042
CRC06989_1
CR11041
JI169611.1
Dviv_isotig16515
JI172526.1
Dviv_isotig16514
Hbac_isotig06113
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00047579Inferred_automaticallyRNAi_primary
WBRNAi00047578Inferred_automaticallyRNAi_primary
WBRNAi00015130Inferred_automaticallyRNAi_primary
WBRNAi00032394Inferred_automaticallyRNAi_primary
WBRNAi00015131Inferred_automaticallyRNAi_primary
Expr_patternExpr1018512
Expr1037980
Expr1151416
Expr2003819
Expr2022039
Drives_constructWBCnstr00026453
Construct_productWBCnstr00026453
Microarray_results (35)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037682:sma-2_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059763:neuron_expressed
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:CAN
WBPaper00061340:PLM
WBPaper00061340:SIA
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061527:nrde-3-tra-4_10484
WBPaper00061527:trcs-2_5724-R11A8.7_17645
WBPaper00061651:CAN_enriched
WBPaper00062156:jmjd-5(zr1234)_upregulated_germline
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
cgc4489_group_12
WBPaper00025032:cluster_28
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00032062:age_regulated_genes
WBPaper00036286:Pattern_F
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
WBPaper00048989:N2_allantoin_downregulated
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:mixed_oogenesis-somatic
Interaction (15)
Map_infoPositivePositive_cloneF46H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-1.78671
ReferenceWBPaper00055090
WBPaper00060275
MethodGene