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WormBase Tree Display for Gene: WBGene00018518

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Name Class

WBGene00018518SMapS_parentSequenceF46H5
IdentityVersion1
NameSequence_nameF46H5.2
Molecular_name (12)
Other_nameCELE_F46H5.2Accession_evidenceNDBBX284606
Public_nameF46H5.2
DB_infoDatabaseAceViewgeneXH885
WormQTLgeneWBGene00018518
WormFluxgeneWBGene00018518
NDBlocus_tagCELE_F46H5.2
PanthergeneCAEEL|WormBase=WBGene00018518|UniProtKB=Q20490
familyPTHR22227
NCBIgene180989
RefSeqproteinNM_001375063.2
NM_001029504.8
NM_001392800.1
TREEFAMTREEFAM_IDTF319884
TrEMBLUniProtAccQ7Z1R2
Q7Z1R1
Q20490
UniProt_GCRPUniProtAccQ20490
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (59)
RNASeq_FPKM (74)
GO_annotation00068290
00068291
00123632
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable kinase activity and protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in phosphorylation. Is an ortholog of human PABIR1 (PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF46H5.2a
F46H5.2b
F46H5.2c
Corresponding_transcriptF46H5.2a.1
F46H5.2a.2
F46H5.2b.1
F46H5.2c.1
F46H5.2c.2
F46H5.2c.3
Other_sequenceCR11042
CRC06989_1
CR11041
JI169611.1
Dviv_isotig16515
JI172526.1
Dviv_isotig16514
Hbac_isotig06113
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00047579Inferred_automaticallyRNAi_primary
WBRNAi00047578Inferred_automaticallyRNAi_primary
WBRNAi00015130Inferred_automaticallyRNAi_primary
WBRNAi00032394Inferred_automaticallyRNAi_primary
WBRNAi00015131Inferred_automaticallyRNAi_primary
Expr_patternExpr1018512
Expr1037980
Expr1151416
Expr2003819
Expr2022039
Drives_constructWBCnstr00026453
Construct_productWBCnstr00026453
Microarray_results (35)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037682:sma-2_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059763:neuron_expressed
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:CAN
WBPaper00061340:PLM
WBPaper00061340:SIA
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061527:nrde-3-tra-4_10484
WBPaper00061527:trcs-2_5724-R11A8.7_17645
WBPaper00061651:CAN_enriched
WBPaper00062156:jmjd-5(zr1234)_upregulated_germline
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
cgc4489_group_12
WBPaper00025032:cluster_28
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00032062:age_regulated_genes
WBPaper00036286:Pattern_F
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
WBPaper00048989:N2_allantoin_downregulated
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:mixed_oogenesis-somatic
Interaction (15)
Map_infoPositivePositive_cloneF46H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-1.78671
ReferenceWBPaper00055090
WBPaper00060275
MethodGene