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WormBase Tree Display for Gene: WBGene00018195

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Name Class

WBGene00018195SMapS_parentSequenceF39E9
IdentityVersion2
NameCGC_namebtb-16Person_evidenceWBPerson261
Sequence_nameF39E9.2
Molecular_nameF39E9.2
F39E9.2.1
CE32655
Other_nameCELE_F39E9.2Accession_evidenceNDBBX284602
Public_namebtb-16
DB_infoDatabaseAceViewgene2D587
WormQTLgeneWBGene00018195
WormFluxgeneWBGene00018195
NDBlocus_tagCELE_F39E9.2
PanthergeneCAEEL|WormBase=WBGene00018195|UniProtKB=O17112
familyPTHR22744
NCBIgene173674
RefSeqproteinNM_062098.6
TREEFAMTREEFAM_IDTF322195
TrEMBLUniProtAccO17112
UniProt_GCRPUniProtAccO17112
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
207 Nov 2007 11:51:23WBPerson2970Name_changeCGC_namebtb-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbtb
AlleleWBVar00361316
WBVar00361317
WBVar01499702
WBVar02120786
WBVar00548191
WBVar00718057
WBVar00718058
WBVar02075834
WBVar00718059
WBVar02123186
WBVar00718060
WBVar02075835
WBVar00718061
WBVar00718062
WBVar00718063
WBVar00718064
WBVar00718065
WBVar02121721
WBVar00718066
WBVar00718067
WBVar02120617
WBVar01498435
WBVar02124673
WBVar02122098
WBVar02121546
WBVar02123019
WBVar02121370
WBVar01500106
WBVar01790969
WBVar02124872
WBVar01790970
WBVar02120456
WBVar01790971
WBVar02075123
WBVar02122302
WBVar01367177
WBVar02121950
WBVar02080928
WBVar01504205
WBVar00602229
WBVar02122532
WBVar02122355
WBVar00169025
WBVar00169026
WBVar00169027
WBVar02122914
WBVar00169028
WBVar00169029
WBVar00169030
WBVar00169031
WBVar02124390
WBVar02123659
WBVar02124763
WBVar01235910
WBVar01500024
WBVar01235912
WBVar01235913
WBVar01500025
WBVar01235914
WBVar01982373
WBVar01235915
WBVar01235916
WBVar02120928
WBVar01235919
WBVar02122218
WBVar01235920
WBVar01235922
WBVar01245006
WBVar01245017
WBVar02122780
WBVar02121131
WBVar01301977
WBVar01916184
WBVar00361314
WBVar00361315
RNASeq_FPKM (74)
OrthologWBGene00060626Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00060625Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00060783Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00038719Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00041941Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042305Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042316Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00042318Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00042405Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042406Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00066996Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00086314Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066969Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066970Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066975Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00086312Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066981Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00086299Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066990Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066991Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066988Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00065829Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00084610Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066986Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066987Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066511Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00148403Caenorhabditis brenneriFrom_analysisOMA
WBGene00081572Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00190638Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00191345Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00164526Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00128902Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00084912Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00066980Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00094388Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00164812Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00039936Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041397Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222201Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9418Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP38.g15088Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g22058Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00246.g7812Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00443.g10913Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g828Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6100Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6809Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6901Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6902Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6978Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7067Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7106Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7108Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7109Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7116Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7655Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7656Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7658Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7659Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7660Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7661Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7662Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7663Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7664Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7665Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7666Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7667Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7668Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7669Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7682Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7683Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7684Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7732Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7734Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7737Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7740Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7745Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7750Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7778Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7779Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7782Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g9196Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g23119Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5769Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5770Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5771Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5794Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13906Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13907Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15985Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9482Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02172.g25225Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02752.g27801Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03159.g29263Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03159.g29264Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03159.g29265Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03280.g29661Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03447.g30231Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03482.g30338Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_004092Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004093Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004094Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004095Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004096Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004097Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004098Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004099Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004101Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004102Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004103Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004104Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004233Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007458Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007460Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011368Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011369Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_021764Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g2692Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g3930Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00060790Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065966Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066512Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066971Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066972Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066973Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066974Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066976Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066977Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066978Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066979Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066982Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066983Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066984Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066989Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066992Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066993Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066994Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066995Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00067020Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068746Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00071550Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00076635Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077082Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084621Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084911Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00085421Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086300Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086306Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086323Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00247035Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00116330Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256306Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (29)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF39E9.2
Corresponding_CDS_historyF39E9.2:wp88
Corresponding_transcriptF39E9.2.1
Other_sequenceCR01799
CRC03531_1
Associated_featureWBsf644049
WBsf220998
Experimental_infoRNAi_resultWBRNAi00046776Inferred_automaticallyRNAi_primary
WBRNAi00014601Inferred_automaticallyRNAi_primary
WBRNAi00097119Inferred_automaticallyRNAi_primary
Expr_patternExpr1150651
Expr2009665
Expr2027904
Drives_constructWBCnstr00026708
Construct_productWBCnstr00026708
Microarray_results (13)
Expression_cluster (241)
Interaction (155)
Map_infoMapIIPosition-6.84748Error0.016437
PositivePositive_cloneF39E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene