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WormBase Tree Display for Gene: WBGene00041941

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Name Class

WBGene00041941SMapS_parentSequencecb25.NA_014
IdentityVersion3
NameSequence_nameCBG23633
Molecular_nameCBG23633
CBG23633.1
CBP43202
Other_nameCBG_23633Accession_evidenceNDBHE601421
Public_nameCBG23633
DB_infoDatabaseNDBlocus_tagCBG_23633
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:47WBPerson2970Name_changeCGC_nameCbr-btb-19
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00036022
WBVar00036037
WBVar00036042
WBVar00036027
WBVar00036032
RNASeq_FPKMWBls:00000022.31493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.42479From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.65655From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.22992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.27732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.36986From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.06174From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000312.2541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.50044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
7.37727From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.25178From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
7.00211From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.6614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.38609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.52374From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.5053From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
10.7221From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.3979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.65994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.228499From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.9885From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
5.737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.8533From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.3609From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.47811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.46651From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.77385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.98307From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.19228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.01305From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4e-06From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.08608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.35579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.70627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.07891From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.1459From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.58553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.66806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.2456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.6268From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.01545From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.53148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.003277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.502094From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.857492From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.62342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.15864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.9e-05From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.931127From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.94127From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.36016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.50044From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.92702From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.06729From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.67345From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (50)
Paralog (24)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. Is an ortholog of C. elegans btb-17; btb-16; and btb-19.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23633
Corresponding_CDS_historyCBG23633:bp194
CBG23633:bp255
Corresponding_transcriptCBG23633.1
Experimental_infoExpr_patternExpr1062124
Microarray_resultsGPL8303_CB6_WBGene00041941_A
GPL8303_CB6_WBGene00041941_C
GPL14143_CBG23633_454-513_0.880_33_A
Remark[180319 gw3] The CGC name Cbr-btb-19 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene