WormBase Tree Display for Gene: WBGene00042316

WBGene00042316 SMap: S_parent: Sequence: cb25.NA_101
  Identity: Version: 2
    Name: CGC_name: Cbr-btb-16.3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG24135
      Molecular_name: CBG24135
        CBG24135.1
        CBP12752
        CBG24135.2
      Other_name: CBG_24135 Accession_evidence: NDB HE601030
      Public_name: Cbr-btb-16.3
    DB_info: Database: NDB locus_tag CBG_24135
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbr-btb-16.3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: btb
    RNASeq_FPKM: WBls:0000002 2.94147 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        4.72954 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.24738 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        8.07113 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        5.06214 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.28422 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.39473 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 5.69451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        6.09678 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        6.49904 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        11.9621 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        8.05188 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 4.02317 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        4.78543 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        5.54768 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        2.63249 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        3.65119 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        4.16022 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        4.94655 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.5428 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.6284 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.410753 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.612477 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.821506 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.11342 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.29588 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.90919 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.30181 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        2.69442 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        2.83051 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        5.42254 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 13.8563 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        21.5186 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        22.5065 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        23.6347 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        24.7629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        24.9485 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        21.6324 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        23.2676 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        31.8988 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 10.3842 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        3.87815 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        4.4246 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        5.29539 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        5.7251 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        5.94149 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        5.51024 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        5.97136 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        6.12075 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 4.02317 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.96451 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        4.57707 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.89556 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (73)
    Paralog (24)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. Is an ortholog of C. elegans btb-16. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG24135
    Corresponding_CDS_history: CBG24135:bp194
    Corresponding_transcript: CBG24135.1
      CBG24135.2
    Other_sequence: CBC07391_1
      CRC02010_1
      CR06291
      CBC10422_1
  Experimental_info: Microarray_results: GPL8303_CB6_WBGene00042316_C
  Method: Gene