WormBase Tree Display for Variation: WBVar01235914
expand all nodes | collapse all nodes | view schema
WBVar01235914 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01235914 | |||||
Other_name | cewivar00009041 | ||||||
CE32655:p.Ala148= | |||||||
F39E9.2.1:c.444T>G | |||||||
HGVSg | CHROMOSOME_II:g.3297399T>G | ||||||
Sequence_details | SMap | S_parent | Sequence | F39E9 | |||
Flanking_sequences | CTGCAATTCTCCTTTGACGAGATGTTTCTTCCATCCGAGAAAAACGACGC | TTTTTAGTGATCGGAGAACGCAAGCTGCATGTTAATAAGGCGGTGAGTTA | |||||
Mapping_target | F39E9 | ||||||
Type_of_mutation | Substitution | t | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (31) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539074267 | |||
History | Acquires_merge | WBVar01367182 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00018195 | |||||
Transcript | F39E9.2.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F39E9.2.1:c.444T>G | ||||||
HGVSp | CE32655:p.Ala148= | ||||||
cDNA_position | 469 | ||||||
CDS_position | 444 | ||||||
Protein_position | 148 | ||||||
Exon_number | 3/6 | ||||||
Codon_change | gcT/gcG | ||||||
Amino_acid_change | A | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |