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WormBase Tree Display for Gene: WBGene00017983

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Name Class

WBGene00017983SMapS_parentSequenceF32D1
IdentityVersion1
NameSequence_nameF32D1.3
Molecular_nameF32D1.3a
F32D1.3a.1
CE09867
F32D1.3c
CE51678
F32D1.3b
F32D1.3c.1
Other_nameCELE_F32D1.3Accession_evidenceNDBBX284605
Public_nameF32D1.3
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (357)
StrainWBStrain00002897
RNASeq_FPKM (74)
GO_annotation00002337
00002338
00002339
00027695
00027696
00027697
00027698
00027699
00027700
00027701
Ortholog (32)
ParalogWBGene00000244Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003858Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003885Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018175Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021444Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021613Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00043992Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable mannosyltransferase activity. Predicted to be involved in protein O-linked mannosylation. Predicted to be located in endoplasmic reticulum membrane. Is an ortholog of human TMTC2 (transmembrane O-mannosyltransferase targeting cadherins 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF32D1.3a
F32D1.3c
Corresponding_transcriptF32D1.3b
F32D1.3a.1
F32D1.3c.1
Other_sequenceCBC02177_1
JI464493.1
CR10595
CRC04290_1
Dviv_isotig15882
JI470116.1
CGC00589_1
Associated_feature (18)
Experimental_infoRNAi_resultWBRNAi00046124Inferred_automaticallyRNAi_primary
WBRNAi00014212Inferred_automaticallyRNAi_primary
WBRNAi00031674Inferred_automaticallyRNAi_primary
Expr_patternChronogram950
Expr5935
Expr1026184
Expr1037739
Expr1150008
Expr2003216
Expr2021428
Drives_constructWBCnstr00003414
WBCnstr00026866
Construct_productWBCnstr00026866
Microarray_results (18)
Expression_clusterWBPaper00032425:down_in_alg-1
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:BAG-neuron_embryo_enriched
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00044736:flat_dev_expression
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046121:ecdoderm_unique
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00053289:DREAM-target
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00056167:Cry5B_upregulated
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058969:RIS_enriched
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_10xg_downregulated
WBPaper00061340:AIA
WBPaper00061340:AIB
WBPaper00061340:ALA
WBPaper00061340:ALM_PLM
WBPaper00061340:AVA
WBPaper00061340:AVB
WBPaper00061340:AVE
WBPaper00061340:AVH
WBPaper00061340:AVJ
WBPaper00061340:BAG
WBPaper00061340:DA
WBPaper00061340:DB
WBPaper00061340:DVA
WBPaper00061340:F_U
WBPaper00061340:G2_and_W_blasts
WBPaper00061340:Glia
WBPaper00061340:hyp3
WBPaper00061340:I5
WBPaper00061340:M1_parent
WBPaper00061340:M4_parent
WBPaper00061340:Neuroblast_AIZ_FLP
WBPaper00061340:NSM_parent
WBPaper00061340:RIA
WBPaper00061340:RIA_parent
WBPaper00061340:RIB
WBPaper00061340:RIC
WBPaper00061340:RIM
WBPaper00061340:RMED
WBPaper00061340:SIA
WBPaper00061340:SIB
WBPaper00061340:Y
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061651:M3_enriched
WBPaper00061651:RIA_enriched
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062095:unc-4(e120)_upregulated_VA-neuron
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062672:dcp-66(RNAi)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00065029:cadmium_upregulated
WBPaper00065158:AFD_enriched
WBPaper00065331:100nM-ivermectin_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:36_2
WBPaper00065841:36_3
WBPaper00065841:48_0
WBPaper00065841:58_0
WBPaper00065841:58_1
WBPaper00065841:60_0
WBPaper00065841:83_0
WBPaper00065841:86_0
WBPaper00065841:96_0
WBPaper00065841:103_0
WBPaper00065841:104_0
WBPaper00065841:105_0
WBPaper00065841:108_0
WBPaper00065841:116_0
WBPaper00065841:120_0
WBPaper00065841:124_0
WBPaper00065841:125_0
WBPaper00065841:126_0
WBPaper00065841:130_0
WBPaper00065841:134_0
WBPaper00065841:140_0
WBPaper00065841:144_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_18
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00036130:mir-243_up_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042548:miRISC_enriched
WBPaper00045015:nhr-25(RNAi)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
InteractionWBInteraction000147426
WBInteraction000277104
WBInteraction000279653
WBInteraction000346816
WBInteraction000466349
Map_infoPositivePositive_cloneF32D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-5.82832
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00065331
MethodGene