WormBase Tree Display for Gene: WBGene00017968
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WBGene00017968 | SMap | S_parent | Sequence | F32A5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | skpo-3 | Person_evidence | WBPerson3395 | |||||
Sequence_name | F32A5.2 | ||||||||
Molecular_name | F32A5.2a | ||||||||
F32A5.2a.1 | |||||||||
CE28288 | |||||||||
F32A5.2b | |||||||||
CE28289 | |||||||||
F32A5.2a.2 | |||||||||
F32A5.2b.1 | |||||||||
Other_name | CELE_F32A5.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | skpo-3 | ||||||||
DB_info | Database | AceView | gene | 2H539 | |||||
WormQTL | gene | WBGene00017968 | |||||||
WormFlux | gene | WBGene00017968 | |||||||
NDB | locus_tag | CELE_F32A5.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017968|UniProtKB=H2KZ53 | |||||||
family | PTHR11475 | ||||||||
NCBI | gene | 174191 | |||||||
RefSeq | protein | NM_063111.5 | |||||||
NM_063110.5 | |||||||||
TrEMBL | UniProtAcc | Q95QH5 | |||||||
H2KZ53 | |||||||||
UniProt_GCRP | UniProtAcc | H2KZ53 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 25 Mar 2014 09:31:05 | WBPerson2970 | Name_change | CGC_name | skpo-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | skpo | ||||||||
Allele (50) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022048 | ||||||||
00022049 | |||||||||
00022050 | |||||||||
00022051 | |||||||||
00022052 | |||||||||
00123232 | |||||||||
00123233 | |||||||||
00123234 | |||||||||
Ortholog (31) | |||||||||
Paralog | WBGene00004256 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004257 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00008627 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009897 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011530 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015841 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016700 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00022743 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019613 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019970 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable peroxidase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F32A5.2a | |||||||
F32A5.2b | |||||||||
Corresponding_transcript | F32A5.2a.1 | ||||||||
F32A5.2a.2 | |||||||||
F32A5.2b.1 | |||||||||
Other_sequence (29) | |||||||||
Associated_feature | WBsf644365 | ||||||||
WBsf988381 | |||||||||
WBsf988382 | |||||||||
WBsf1012501 | |||||||||
WBsf1012502 | |||||||||
WBsf221578 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00026878 | ||||||||
Construct_product | WBCnstr00026878 | ||||||||
Microarray_results (34) | |||||||||
Expression_cluster (242) | |||||||||
Interaction | WBInteraction000166608 | ||||||||
WBInteraction000331896 | |||||||||
WBInteraction000348149 | |||||||||
WBInteraction000454019 | |||||||||
WBInteraction000540394 | |||||||||
WBInteraction000549465 | |||||||||
WBInteraction000567811 | |||||||||
Map_info | Map | II | Position | 0.49978 | |||||
Positive | Positive_clone | F32A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |