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WormBase Tree Display for Gene: WBGene00017968

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Name Class

WBGene00017968SMapS_parentSequenceF32A5
IdentityVersion2
NameCGC_nameskpo-3Person_evidenceWBPerson3395
Sequence_nameF32A5.2
Molecular_nameF32A5.2a
F32A5.2a.1
CE28288
F32A5.2b
CE28289
F32A5.2a.2
F32A5.2b.1
Other_nameCELE_F32A5.2Accession_evidenceNDBBX284602
Public_nameskpo-3
DB_infoDatabaseAceViewgene2H539
WormQTLgeneWBGene00017968
WormFluxgeneWBGene00017968
NDBlocus_tagCELE_F32A5.2
PanthergeneCAEEL|WormBase=WBGene00017968|UniProtKB=H2KZ53
familyPTHR11475
NCBIgene174191
RefSeqproteinNM_063111.5
NM_063110.5
TrEMBLUniProtAccQ95QH5
H2KZ53
UniProt_GCRPUniProtAccH2KZ53
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
225 Mar 2014 09:31:05WBPerson2970Name_changeCGC_nameskpo-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classskpo
Allele (50)
RNASeq_FPKM (74)
GO_annotation00022048
00022049
00022050
00022051
00022052
00123232
00123233
00123234
OrthologWBGene00026488Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00033934Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00054303Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00193955Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00193177Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00136233Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00228234Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7347Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9117Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6943Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12175Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9286Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11888Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6981Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11354Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g25671Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8358Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00586.g12512Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05337.g19526Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-skpo-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold485.g1929Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00152.g5742Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09476Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006459Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02075Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2680Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20259500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4977Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248067Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00273835Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267628Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00004256Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004257Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008627Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009897Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011530Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015841Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016700Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022743Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019613Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019970Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable peroxidase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. Predicted to be located in extracellular space.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF32A5.2a
F32A5.2b
Corresponding_transcriptF32A5.2a.1
F32A5.2a.2
F32A5.2b.1
Other_sequence (29)
Associated_featureWBsf644365
WBsf988381
WBsf988382
WBsf1012501
WBsf1012502
WBsf221578
Experimental_infoRNAi_result (13)
Expr_pattern (5)
Drives_constructWBCnstr00026878
Construct_productWBCnstr00026878
Microarray_results (34)
Expression_cluster (242)
InteractionWBInteraction000166608
WBInteraction000331896
WBInteraction000348149
WBInteraction000454019
WBInteraction000540394
WBInteraction000549465
WBInteraction000567811
Map_infoMapIIPosition0.49978
PositivePositive_cloneF32A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene