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WormBase Tree Display for Gene: WBGene00017160

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Name Class

WBGene00017160SMapS_parentSequenceF01F1
IdentityVersion1
NameSequence_nameF01F1.3
Molecular_nameF01F1.3
F01F1.3.1
CE29250
F01F1.3.2
Other_nameCELE_F01F1.3Accession_evidenceNDBBX284603
Public_nameF01F1.3
DB_infoDatabaseAceViewgene3G963
WormQTLgeneWBGene00017160
WormFluxgeneWBGene00017160
NDBlocus_tagCELE_F01F1.3
NCBIgene175826
RefSeqproteinNM_001382885.1
TREEFAMTREEFAM_IDTF321416
TrEMBLUniProtAccQ19091
UniProt_GCRPUniProtAccQ19091
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (37)
RNASeq_FPKM (74)
Ortholog (29)
Structured_descriptionAutomated_descriptionEnriched in GABAergic neurons; germ line; head mesodermal cell; intestine; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including rotenone; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Armadillo-type fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF01F1.3
Corresponding_transcriptF01F1.3.1
F01F1.3.2
Other_sequenceCBC09736_1
JI459320.1
Acan_isotig13830
Dviv_isotig29796
NAC00496_1
NB08960
BG467754.1
Associated_featureWBsf659002
WBsf659003
WBsf225013
Experimental_infoRNAi_resultWBRNAi00030540Inferred_automaticallyRNAi_primary
WBRNAi00043753Inferred_automaticallyRNAi_primary
WBRNAi00005808Inferred_automaticallyRNAi_primary
WBRNAi00043754Inferred_automaticallyRNAi_primary
WBRNAi00006733Inferred_automaticallyRNAi_primary
WBRNAi00043752Inferred_automaticallyRNAi_primary
WBRNAi00005920Inferred_automaticallyRNAi_primary
Expr_patternExpr1020129
Expr1147733
Expr2002197
Expr2020418
Drives_constructWBCnstr00027522
Construct_productWBCnstr00027522
Microarray_results (21)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00044786:lem-2(tm1582)_upregulated
WBPaper00045050:csr-1(hypomorph)_downregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00048988:daf-16(mu86)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00050053:muscle_enriched_Day4
WBPaper00050053:muscle_enriched_Day12
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:GABAergic-neuron_enriched
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053810:sod-2(ok1030)_downregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L2
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
WBPaper00058945:mir-1(gk276)_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00061340:mu_int_mu_anal
WBPaper00061340:mu_sph
WBPaper00061527:W01F3.2_1554-Y106G6D.8
WBPaper00061651:hmc_enriched
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064502:spe-44(fx110)_downregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065746:eat-2(ad1113)_upregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:4_1
WBPaper00065841:4_2
WBPaper00065841:7_2
WBPaper00065841:7_3
WBPaper00065841:38_0
WBPaper00065841:38_1
WBPaper00065841:38_3
WBPaper00065841:102_0
WBPaper00065841:110_0
WBPaper00065841:110_1
WBPaper00065841:143_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066085:sin-3(syb2172)_downregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
cgc4489_group_11
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_F
WBPaper00026980:intestine_enriched
WBPaper00027758:Group_I
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_5
WBPaper00034739:N2moreDR1350
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_D
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00049311:AgNO3_regulated
WBPaper00050407:hsp-6(RNAi)_upregulated
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
WBPaper00055899:nitroguanidine_regulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (64)
Map_infoPositivePositive_cloneF01F1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.43802
MethodGene