WormBase Tree Display for Gene: WBGene00016971
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WBGene00016971 | SMap | S_parent | Sequence | C56E6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | toe-2 | Person_evidence | WBPerson3232 | |||||
WBPerson555 | |||||||||
Sequence_name | C56E6.3 | ||||||||
Molecular_name | C56E6.3a | ||||||||
C56E6.3a.1 | |||||||||
CE04275 | |||||||||
C56E6.3b | |||||||||
CE35261 | |||||||||
C56E6.3a.2 | |||||||||
C56E6.3b.1 | |||||||||
C56E6.3b.2 | |||||||||
Other_name | CELE_C56E6.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | toe-2 | ||||||||
DB_info | Database | AceView | gene | 2G808 | |||||
WormQTL | gene | WBGene00016971 | |||||||
WormFlux | gene | WBGene00016971 | |||||||
NDB | locus_tag | CELE_C56E6.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016971|UniProtKB=H2KZH5 | |||||||
family | PTHR16206 | ||||||||
NCBI | gene | 174076 | |||||||
RefSeq | protein | NM_001383867.2 | |||||||
NM_001026872.4 | |||||||||
SwissProt | UniProtAcc | H2KZH5 | |||||||
UniProt_GCRP | UniProtAcc | H2KZH5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Mar 2009 11:15:07 | WBPerson9133 | Name_change | CGC_name | toe-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | toe | ||||||||
Allele (50) | |||||||||
Strain | WBStrain00032804 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00002368 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00011427 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00015342 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00016052 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00077693 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Predicted to enable kinase activity. Involved in positive regulation of apoptotic process and regulation of asymmetric cell division. Predicted to be located in several cellular components, including centrosome; chromosome; and midbody. Expressed in several structures, including QL.aa; QL.pp; QR.aa; QR.pp; and oxygen sensory neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C56E6.3a | |||||||
C56E6.3b | |||||||||
Corresponding_transcript | C56E6.3a.1 | ||||||||
C56E6.3a.2 | |||||||||
C56E6.3b.1 | |||||||||
C56E6.3b.2 | |||||||||
Other_sequence | CRC06143_1 | ||||||||
CJC15075_1 | |||||||||
CBC00603_1 | |||||||||
CR00772 | |||||||||
CRC04680_1 | |||||||||
CJC00306_1 | |||||||||
CBC13452_1 | |||||||||
CR06309 | |||||||||
Associated_feature | WBsf650153 | ||||||||
WBsf665619 | |||||||||
WBsf223192 | |||||||||
WBsf223193 | |||||||||
Experimental_info | RNAi_result | WBRNAi00043278 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085111 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022310 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030205 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062175 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr11869 | ||||||||
Expr11870 | |||||||||
Expr1028889 | |||||||||
Expr1037284 | |||||||||
Expr1147256 | |||||||||
Expr2017442 | |||||||||
Expr2035581 | |||||||||
Drives_construct | WBCnstr00019692 | ||||||||
WBCnstr00027667 | |||||||||
WBCnstr00040175 | |||||||||
WBCnstr00040176 | |||||||||
Construct_product | WBCnstr00019407 | ||||||||
WBCnstr00027667 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (150) | |||||||||
Interaction (128) | |||||||||
Map_info | Map | II | Position | -0.197136 | Error | 0.003119 | |||
Positive | Positive_clone | C56E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00032961 | ||||||||
WBPaper00045422 | |||||||||
WBPaper00048732 | |||||||||
WBPaper00062068 | |||||||||
WBPaper00064561 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |