WormBase Tree Display for Gene: WBGene00016971
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WBGene00016971 | SMap | S_parent | Sequence | C56E6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | toe-2 | Person_evidence | WBPerson3232 | |||
WBPerson555 | |||||||
Sequence_name | C56E6.3 | ||||||
Molecular_name | C56E6.3a | ||||||
C56E6.3a.1 | |||||||
CE04275 | |||||||
C56E6.3b | |||||||
CE35261 | |||||||
C56E6.3a.2 | |||||||
C56E6.3b.1 | |||||||
C56E6.3b.2 | |||||||
Other_name | CELE_C56E6.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | toe-2 | ||||||
DB_info | Database | AceView | gene | 2G808 | |||
WormQTL | gene | WBGene00016971 | |||||
WormFlux | gene | WBGene00016971 | |||||
NDB | locus_tag | CELE_C56E6.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016971|UniProtKB=H2KZH5 | |||||
family | PTHR16206 | ||||||
NCBI | gene | 174076 | |||||
RefSeq | protein | NM_001383867.2 | |||||
NM_001026872.4 | |||||||
SwissProt | UniProtAcc | H2KZH5 | |||||
UniProt_GCRP | UniProtAcc | H2KZH5 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | toe | ||||||
Allele (50) | |||||||
Strain | WBStrain00032804 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog (29) | |||||||
Paralog | WBGene00002368 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011427 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00015342 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00016052 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00077693 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to enable kinase activity. Involved in positive regulation of apoptotic process and regulation of asymmetric cell division. Predicted to be located in several cellular components, including centrosome; chromosome; and midbody. Expressed in several structures, including QL.aa; QL.pp; QR.aa; QR.pp; and oxygen sensory neurons. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C56E6.3a | |||||
C56E6.3b | |||||||
Corresponding_transcript | C56E6.3a.1 | ||||||
C56E6.3a.2 | |||||||
C56E6.3b.1 | |||||||
C56E6.3b.2 | |||||||
Other_sequence | CRC06143_1 | ||||||
CJC15075_1 | |||||||
CBC00603_1 | |||||||
CR00772 | |||||||
CRC04680_1 | |||||||
CJC00306_1 | |||||||
CBC13452_1 | |||||||
CR06309 | |||||||
Associated_feature | WBsf650153 | ||||||
WBsf665619 | |||||||
WBsf223192 | |||||||
WBsf223193 | |||||||
Experimental_info | RNAi_result | WBRNAi00043278 | Inferred_automatically | RNAi_primary | |||
WBRNAi00085111 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022310 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030205 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062175 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11869 | ||||||
Expr11870 | |||||||
Expr1028889 | |||||||
Expr1037284 | |||||||
Expr1147256 | |||||||
Expr2017442 | |||||||
Expr2035581 | |||||||
Drives_construct | WBCnstr00019692 | ||||||
WBCnstr00027667 | |||||||
WBCnstr00040175 | |||||||
WBCnstr00040176 | |||||||
Construct_product | WBCnstr00019407 | ||||||
WBCnstr00027667 | |||||||
Microarray_results (24) | |||||||
Expression_cluster (150) | |||||||
Interaction (128) | |||||||
Map_info | Map | II | Position | -0.197136 | Error | 0.003119 | |
Positive | Positive_clone | C56E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00032961 | ||||||
WBPaper00045422 | |||||||
WBPaper00048732 | |||||||
WBPaper00062068 | |||||||
WBPaper00064561 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |