WormBase Tree Display for Gene: WBGene00016971
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| WBGene00016971 | SMap | S_parent | Sequence | C56E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | toe-2 | Person_evidence | WBPerson3232 | |||||
| WBPerson555 | |||||||||
| Sequence_name | C56E6.3 | ||||||||
| Molecular_name | C56E6.3a | ||||||||
| C56E6.3a.1 | |||||||||
| CE04275 | |||||||||
| C56E6.3b | |||||||||
| CE35261 | |||||||||
| C56E6.3a.2 | |||||||||
| C56E6.3b.1 | |||||||||
| C56E6.3b.2 | |||||||||
| Other_name | CELE_C56E6.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | toe-2 | ||||||||
| DB_info | Database | AceView | gene | 2G808 | |||||
| WormQTL | gene | WBGene00016971 | |||||||
| WormFlux | gene | WBGene00016971 | |||||||
| NDB | locus_tag | CELE_C56E6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016971|UniProtKB=H2KZH5 | |||||||
| family | PTHR16206 | ||||||||
| NCBI | gene | 174076 | |||||||
| RefSeq | protein | NM_001383867.2 | |||||||
| NM_001026872.4 | |||||||||
| SwissProt | UniProtAcc | H2KZH5 | |||||||
| UniProt_GCRP | UniProtAcc | H2KZH5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2009 11:15:07 | WBPerson9133 | Name_change | CGC_name | toe-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | toe | ||||||||
| Allele | WBVar02018005 | ||||||||
| WBVar01499702 | |||||||||
| WBVar02151440 | |||||||||
| WBVar01498435 | |||||||||
| WBVar02125752 | |||||||||
| WBVar02125753 | |||||||||
| WBVar02125754 | |||||||||
| WBVar01783765 | |||||||||
| WBVar01783766 | |||||||||
| WBVar01783767 | |||||||||
| WBVar00093904 | |||||||||
| WBVar01438198 | |||||||||
| WBVar01438199 | |||||||||
| WBVar00368379 | |||||||||
| WBVar00368380 | |||||||||
| WBVar00368381 | |||||||||
| WBVar00368382 | |||||||||
| WBVar00368383 | |||||||||
| WBVar00368384 | |||||||||
| WBVar00738573 | |||||||||
| WBVar00368385 | |||||||||
| WBVar00738574 | |||||||||
| WBVar00738575 | |||||||||
| WBVar00368386 | |||||||||
| WBVar00738576 | |||||||||
| WBVar00368387 | |||||||||
| WBVar00738577 | |||||||||
| WBVar00368388 | |||||||||
| WBVar00738578 | |||||||||
| WBVar00368389 | |||||||||
| WBVar00738579 | |||||||||
| WBVar00738580 | |||||||||
| WBVar00738581 | |||||||||
| WBVar00738582 | |||||||||
| WBVar00738583 | |||||||||
| WBVar00738584 | |||||||||
| WBVar00738585 | |||||||||
| WBVar00738586 | |||||||||
| WBVar00738587 | |||||||||
| WBVar00738588 | |||||||||
| WBVar01626636 | |||||||||
| WBVar00738589 | |||||||||
| WBVar00738590 | |||||||||
| WBVar00738591 | |||||||||
| WBVar00738592 | |||||||||
| WBVar00738593 | |||||||||
| WBVar00225036 | |||||||||
| WBVar01429575 | |||||||||
| WBVar01374112 | |||||||||
| WBVar02130116 | |||||||||
| Strain | WBStrain00032804 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00002368 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00011427 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015342 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016052 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00077693 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable kinase activity. Involved in positive regulation of apoptotic process and regulation of asymmetric cell division. Predicted to be located in several cellular components, including centrosome; chromosome; and midbody. Expressed in several structures, including QL.aa; QL.pp; QR.aa; QR.pp; and oxygen sensory neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56E6.3a | |||||||
| C56E6.3b | |||||||||
| Corresponding_transcript | C56E6.3a.1 | ||||||||
| C56E6.3a.2 | |||||||||
| C56E6.3b.1 | |||||||||
| C56E6.3b.2 | |||||||||
| Other_sequence | CRC06143_1 | ||||||||
| CJC15075_1 | |||||||||
| CBC00603_1 | |||||||||
| CR00772 | |||||||||
| CRC04680_1 | |||||||||
| CJC00306_1 | |||||||||
| CBC13452_1 | |||||||||
| CR06309 | |||||||||
| Associated_feature | WBsf650153 | ||||||||
| WBsf665619 | |||||||||
| WBsf223192 | |||||||||
| WBsf223193 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043278 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085111 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022310 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030205 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062175 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11869 | ||||||||
| Expr11870 | |||||||||
| Expr1028889 | |||||||||
| Expr1037284 | |||||||||
| Expr1147256 | |||||||||
| Expr2017442 | |||||||||
| Expr2035581 | |||||||||
| Drives_construct | WBCnstr00019692 | ||||||||
| WBCnstr00027667 | |||||||||
| WBCnstr00040175 | |||||||||
| WBCnstr00040176 | |||||||||
| Construct_product | WBCnstr00019407 | ||||||||
| WBCnstr00027667 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (128) | |||||||||
| Map_info | Map | II | Position | -0.197136 | Error | 0.003119 | |||
| Positive | Positive_clone | C56E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032961 | ||||||||
| WBPaper00045422 | |||||||||
| WBPaper00048732 | |||||||||
| WBPaper00062068 | |||||||||
| WBPaper00064561 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
