WormBase Tree Display for Gene: WBGene00016534
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| WBGene00016534 | SMap | S_parent | Sequence | C39D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C39D10.7 | |||||||
| Molecular_name | C39D10.7 | ||||||||
| C39D10.7.1 | |||||||||
| CE47099 | |||||||||
| Other_name | CELE_C39D10.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C39D10.7 | ||||||||
| DB_info | Database | AceView | gene | XI528 | |||||
| WormQTL | gene | WBGene00016534 | |||||||
| WormFlux | gene | WBGene00016534 | |||||||
| NDB | locus_tag | CELE_C39D10.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016534|UniProtKB=Q18529 | |||||||
| family | PTHR23301 | ||||||||
| NCBI | gene | 181050 | |||||||
| RefSeq | protein | NM_076933.10 | |||||||
| TREEFAM | TREEFAM_ID | TF327648 | |||||||
| TrEMBL | UniProtAcc | Q18529 | |||||||
| UniProt_GCRP | UniProtAcc | Q18529 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (99) | |||||||||
| Strain | WBStrain00037065 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061527 | ||||||||
| 00122124 | |||||||||
| 00122125 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00000465 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010351 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015102 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019833 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021005 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | C39D10.7 encodes a large (1185-residue) protein with 11 chitin-bindingperitrophin-A domains; C39D10.7 transcripts are enriched inhermaphrodites; like CEJ-1 and CPG-2, C39D10.7 might participate ineggshell synthesis and early embryonic development, and C39D10.7'smultiple peritrophin-A domains might enable mechanical cross-linking ofchitin; however, C39D10.7 alone has no visible function in mass RNAiassays. | Paper_evidence | WBPaper00028588 | |||||
| WBPaper00029231 | |||||||||
| WBPaper00029232 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 09 Apr 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable chitin binding activity. Predicted to be located in extracellular region. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39D10.7 | |||||||
| Corresponding_CDS_history | C39D10.7:wp230 | ||||||||
| Corresponding_transcript | C39D10.7.1 | ||||||||
| Other_sequence | CRC05908_1 | ||||||||
| Hbac_isotig01409 | |||||||||
| CR03820 | |||||||||
| Associated_feature | WBsf670785 | ||||||||
| WBsf237625 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr4148 | ||||||||
| Expr1016448 | |||||||||
| Expr1146199 | |||||||||
| Expr2001536 | |||||||||
| Expr2019757 | |||||||||
| Drives_construct | WBCnstr00027993 | ||||||||
| Construct_product | WBCnstr00027993 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (238) | |||||||||
| Interaction (231) | |||||||||
| Map_info | Positive | Positive_clone | C39D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -1.00384 | |||||||
| Method | Gene |
