WormBase Tree Display for Gene: WBGene00016333
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| WBGene00016333 | SMap | S_parent | Sequence | C32F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C32F10.8 | |||||||
| Molecular_name | C32F10.8a | ||||||||
| C32F10.8a.1 | |||||||||
| CE32815 | |||||||||
| C32F10.8b | |||||||||
| CE33563 | |||||||||
| C32F10.8a.2 | |||||||||
| C32F10.8a.3 | |||||||||
| C32F10.8b.1 | |||||||||
| Other_name | CELE_C32F10.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C32F10.8 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| Strain | WBStrain00036955 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00025283 | ||||||||
| 00025284 | |||||||||
| 00025285 | |||||||||
| 00121971 | |||||||||
| 00121972 | |||||||||
| 00121973 | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00009232 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009628 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010984 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011436 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable L-alanine:2-oxoglutarate aminotransferase activity. Predicted to be involved in L-alanine catabolic process and biosynthetic process. Expressed in mc1 and pm3. Human ortholog(s) of this gene implicated in liver cancer; liver cirrhosis; and non-alcoholic fatty liver disease. Is an ortholog of human GPT (glutamic--pyruvic transaminase) and GPT2 (glutamic--pyruvic transaminase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9452 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4552) | ||||
| DOID:3571 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18062,HGNC:4552) | ||||||
| DOID:5082 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4552) | ||||||
| DOID:0080208 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18062,HGNC:4552) | ||||||
| Molecular_info | Corresponding_CDS | C32F10.8a | |||||||
| C32F10.8b | |||||||||
| Corresponding_CDS_history | C32F10.8:wp90 | ||||||||
| Corresponding_transcript | C32F10.8a.1 | ||||||||
| C32F10.8a.2 | |||||||||
| C32F10.8a.3 | |||||||||
| C32F10.8b.1 | |||||||||
| Other_sequence (155) | |||||||||
| Associated_feature | WBsf649194 | ||||||||
| WBsf983776 | |||||||||
| WBsf983777 | |||||||||
| WBsf219490 | |||||||||
| WBsf219491 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001171 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003068 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082429 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041702 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1179 | ||||||||
| Expr5402 | |||||||||
| Expr5403 | |||||||||
| Expr15822 | |||||||||
| Expr1024325 | |||||||||
| Expr1036993 | |||||||||
| Expr1145722 | |||||||||
| Expr2001321 | |||||||||
| Expr2019544 | |||||||||
| Drives_construct | WBCnstr00002477 | ||||||||
| WBCnstr00004353 | |||||||||
| WBCnstr00028150 | |||||||||
| Construct_product | WBCnstr00028150 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction (118) | |||||||||
| Map_info | Positive | Positive_clone | C32F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.465567 | |||||||
| Reference | WBPaper00031006 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061589 | |||||||||
| Method | Gene |
