WormBase Tree Display for CDS: C32F10.8b
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C32F10.8b | SMap | S_parent | Sequence | C32F10 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 81 | |||
242 | 1015 | |||||
1156 | 1232 | |||||
1283 | 1381 | |||||
1429 | 1450 | |||||
DB_info | Database | KEGG | KEGG_id | 2.6.1.2 | ||
TrEMBL | UniProtAcc | Q86GU3 | ||||
UniProt | UniProtAcc | Q86GU3 | ||||
AlphaFold | entry | Q86GU3 | ||||
NCBI_protein | GI_number | GI:351065899 | ||||
Protein_id | CHROMOSOME_I | CCD61913 | 1 | |||
DB_remark | contains similarity to Pfam domain PF00155 (Aminotransferase class I and II); contains similarity to Interpro domains IPR045088 (Aminotransferase ALAT1/2-like), IPR015422 (Pyridoxal phosphate-dependent transferase, small domain), IPR015424 (Pyridoxal phosphate-dependent transferase), IPR004839 (Aminotransferase, class I/classII), IPR015421 (Pyridoxal phosphate-dependent transferase, major domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | BJ154584 | |||
Visible | Gene | WBGene00016333 | ||||
Corresponding_transcript | C32F10.8b.1 | |||||
Corresponding_protein | CE33563 | |||||
Corresponding_PCR_product | cenix:22-a11 | |||||
mv_C32F10.8 | ||||||
sjj_C32F10.8 | ||||||
Corresponding_oligo_set (11) | ||||||
Matching_cDNA | young_adult_Nanopore_Roach_80512 | |||||
young_adult_Nanopore_Roach_88951 | ||||||
adult_Nanopore_Roach_104198 | ||||||
RNAi_result | WBRNAi00001171 | |||||
WBRNAi00003068 | ||||||
WBRNAi00082429 | ||||||
WBRNAi00082582 | ||||||
WBRNAi00041702 | ||||||
Microarray_results (12) | ||||||
Brief_identification | alanine transaminase | Accession_evidence | UniProt | TR:Q86GU3 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |