WormBase Tree Display for Gene: WBGene00016249

WBGene00016249 SMap: S_parent: Sequence: C30C11
  Identity: Version: 2
    Name: CGC_name: mrpl-32 Person_evidence: WBPerson261
      Sequence_name: C30C11.1
      Molecular_name: C30C11.1
        C30C11.1.1
        CE48620
      Other_name: CELE_C30C11.1 Accession_evidence: NDB BX284603
      Public_name: mrpl-32
    DB_info: Database: AceView gene 3J539
        WormQTL gene WBGene00016249
        WormFlux gene WBGene00016249
        NDB locus_tag CELE_C30C11.1
        Panther gene CAEEL|WormBase=WBGene00016249|UniProtKB=Q04907
          family PTHR21026
        NCBI gene 176197
        RefSeq protein NM_066469.6
        SwissProt UniProtAcc Q04907
        TREEFAM TREEFAM_ID TF106139
        UniProt_GCRP UniProtAcc Q04907
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrpl-32
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrpl
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00052638
      00052639
      00052640
      00052641
      00052642
      00052643
      00052644
      00121913
      00121914
      00121915
    Contained_in_operon: CEOP3528
    Ortholog (29)
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Is an ortholog of human MRPL32 (mitochondrial ribosomal protein L32). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C30C11.1
    Corresponding_CDS_history: C30C11.1:wp239
    Corresponding_transcript: C30C11.1.1
    Other_sequence (16)
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00008467 Inferred_automatically: RNAi_primary
      WBRNAi00059885 Inferred_automatically: RNAi_primary
      WBRNAi00033239 Inferred_automatically: RNAi_primary
      WBRNAi00002708 Inferred_automatically: RNAi_primary
      WBRNAi00072956 Inferred_automatically: RNAi_primary
      WBRNAi00024681 Inferred_automatically: RNAi_primary
      WBRNAi00072955 Inferred_automatically: RNAi_primary
      WBRNAi00041531 Inferred_automatically: RNAi_primary
      WBRNAi00109866 Inferred_automatically: RNAi_primary
      WBRNAi00002528 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017391
      Expr1036950
      Expr1145553
      Expr2013713
      Expr2031948
    Drives_construct: WBCnstr00028217
    Construct_product: WBCnstr00028217
    Microarray_results (20)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032528:L3_enriched
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045417:128Q-huntingtin_upreglated
      WBPaper00045521:Gender_Neutral
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049626:UNC-75_target
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061340:pm7
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:mrpl-54-lbp-4
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_7
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00027342:alpha-Synuclein(WT)_upregulated
      WBPaper00031832:slr-2_regulated
      WBPaper00032165:differentially_expressed_with_age_medoid_6
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_E
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(186_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_ME
      [cgc6390]:intrinsic
    Interaction (41)
  Map_info: Map: III Position: -0.25799 Error: 0.000572
    Positive: Positive_clone: C30C11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041771
    WBPaper00055090
    WBPaper00062388
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene