WormBase Tree Display for Gene: WBGene00016101
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| WBGene00016101 | SMap | S_parent | Sequence | C25E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C25E10.12 | |||||||
| Molecular_name | C25E10.12 | ||||||||
| C25E10.12.1 | |||||||||
| CE06874 | |||||||||
| Other_name | CELE_C25E10.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C25E10.12 | ||||||||
| DB_info | Database | AceView | gene | 5J542 | |||||
| WormQTL | gene | WBGene00016101 | |||||||
| WormFlux | gene | WBGene00016101 | |||||||
| NDB | locus_tag | CELE_C25E10.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016101|UniProtKB=Q18161 | |||||||
| family | PTHR12905 | ||||||||
| NCBI | gene | 182896 | |||||||
| RefSeq | protein | NM_072948.5 | |||||||
| SwissProt | UniProtAcc | Q18161 | |||||||
| TREEFAM | TREEFAM_ID | TF314305 | |||||||
| UniProt_GCRP | UniProtAcc | Q18161 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| Strain | WBStrain00003554 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00121785 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00011579 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019479 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | C25E10.12 encodes one of three C. elegans metallophoshopesterase that are related to human 239FB, which is encoded by a gene in the 11p13-p14 chromosomal region associated with various tumors and WAGR (Wilms' tumor, aniridia, genitourinary anomalies, and mental retardation) syndrome; large-scale expression studies suggest that C25E10.12 is expressed in a number of different tissues including the intestine, hypodermis, nervous system, and epithelial arcade cells. | Paper_evidence | WBPaper00031006 | |||||
| WBPaper00032352 | |||||||||
| WBPaper00032353 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Nov 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable hydrolase activity. Is an ortholog of human MPPED1 (metallophosphoesterase domain containing 1) and MPPED2 (metallophosphoesterase domain containing 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25E10.12 | |||||||
| Corresponding_transcript | C25E10.12.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf1000806 | ||||||||
| WBsf1020127 | |||||||||
| WBsf234170 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041182 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr5336 | ||||||||
| Expr1012432 | |||||||||
| Expr1036875 | |||||||||
| Expr1145213 | |||||||||
| Expr2001076 | |||||||||
| Expr2019297 | |||||||||
| Drives_construct | WBCnstr00004006 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction | WBInteraction000183324 | ||||||||
| WBInteraction000197118 | |||||||||
| WBInteraction000570706 | |||||||||
| WBInteraction000573819 | |||||||||
| WBInteraction000574371 | |||||||||
| Map_info | Positive | Positive_clone | C25E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.9158 | |||||||
| Reference | WBPaper00032352 | ||||||||
| WBPaper00032354 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
