WormBase Tree Display for Gene: WBGene00011579
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| WBGene00011579 | SMap | S_parent | Sequence | T07D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T07D4.2 | |||||||
| Molecular_name | T07D4.2a | ||||||||
| T07D4.2a.1 | |||||||||
| CE40620 | |||||||||
| T07D4.2b | |||||||||
| CE40621 | |||||||||
| T07D4.2c | |||||||||
| CE40622 | |||||||||
| T07D4.2b.1 | |||||||||
| T07D4.2c.1 | |||||||||
| Other_name | cm14e7 | Paper_evidence | WBPaper00032353 | ||||||
| WBPaper00032354 | |||||||||
| CELE_T07D4.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | T07D4.2 | ||||||||
| DB_info | Database | AceView | gene | 2J160 | |||||
| WormQTL | gene | WBGene00011579 | |||||||
| WormFlux | gene | WBGene00011579 | |||||||
| NDB | locus_tag | CELE_T07D4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011579|UniProtKB=Q22306 | |||||||
| family | PTHR12905 | ||||||||
| NCBI | gene | 174416 | |||||||
| RefSeq | protein | NM_001027152.3 | |||||||
| NM_001027153.4 | |||||||||
| NM_001083164.4 | |||||||||
| SwissProt | UniProtAcc | Q22306 | |||||||
| TREEFAM | TREEFAM_ID | TF314305 | |||||||
| UniProt_GCRP | UniProtAcc | Q22306 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (76) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074843 | ||||||||
| 00118813 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00016101 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019479 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | T07D4.2 encodes one of three C. elegans metallophoshopesterase that are related to human 239FB, which is encoded by a gene in the 11p13-p14 chromosomal region associated with various tumors and WAGR (Wilms' tumor, aniridia, genitourinary anomalies, and mental retardation) syndrome. | Paper_evidence | WBPaper00032352 | |||||
| WBPaper00032353 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Nov 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable hydrolase activity. Is an ortholog of human MPPED1 (metallophosphoesterase domain containing 1) and MPPED2 (metallophosphoesterase domain containing 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07D4.2a | |||||||
| T07D4.2b | |||||||||
| T07D4.2c | |||||||||
| Corresponding_CDS_history | T07D4.2:wp119 | ||||||||
| Corresponding_transcript | T07D4.2a.1 | ||||||||
| T07D4.2b.1 | |||||||||
| T07D4.2c.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf665857 | ||||||||
| WBsf717747 | |||||||||
| WBsf988844 | |||||||||
| WBsf988845 | |||||||||
| WBsf1012761 | |||||||||
| WBsf1012762 | |||||||||
| WBsf223563 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052758 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018367 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095071 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035305 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018489 | ||||||||
| Expr1156367 | |||||||||
| Expr2005967 | |||||||||
| Expr2024183 | |||||||||
| Drives_construct | WBCnstr00030545 | ||||||||
| Construct_product | WBCnstr00030545 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Positive | Positive_clone | T07D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.914528 | |||||||
| Reference | WBPaper00032353 | ||||||||
| WBPaper00032354 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
