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WormBase Tree Display for Gene: WBGene00015935

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Name Class

WBGene00015935SMapS_parentSequenceC17H12
IdentityVersion1
NameSequence_nameC17H12.10
Molecular_nameC17H12.10
C17H12.10.1
CE16870
Other_nameCELE_C17H12.10Accession_evidenceNDBBX284604
Public_nameC17H12.10
DB_infoDatabaseAceViewgene4H573
WormQTLgeneWBGene00015935
WormFluxgeneWBGene00015935
NDBlocus_tagCELE_C17H12.10
NCBIgene177446
RefSeqproteinNM_068644.6
TREEFAMTREEFAM_IDTF317662
TrEMBLUniProtAccO45081
UniProt_GCRPUniProtAccO45081
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (33)
RNASeq_FPKM (74)
GO_annotation00033838
Ortholog (23)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17H12.10
Corresponding_transcriptC17H12.10.1
Other_sequenceCBC05955_1
Associated_featureWBsf646043
WBsf660247
WBsf996840
WBsf228463
Experimental_infoRNAi_resultWBRNAi00029032Inferred_automaticallyRNAi_primary
WBRNAi00010941Inferred_automaticallyRNAi_primary
WBRNAi00040860Inferred_automaticallyRNAi_primary
Expr_patternExpr1023239
Expr1144906
Expr2000937
Expr2019158
Drives_constructWBCnstr00028442
Construct_productWBCnstr00028442
Microarray_results (19)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037946:LIN-39_interacting
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:A-class-motor-neurons_larva_enriched
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_larva_enriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_larva_enriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044316:HgCl2_20uM_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050496:RID_enriched
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055565:AVK_enriched
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056617:adr-1_upregulated_embryo_transcript
WBPaper00056617:adr-2_upregulated_embryo_transcript
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059117:B.subtilis_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059763:neuron_expressed
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:AIM
WBPaper00061340:AIY
WBPaper00061340:AVB
WBPaper00061340:DA_DB
WBPaper00061340:IL2
WBPaper00061340:RIA
WBPaper00061340:RIM
WBPaper00061340:RIV
WBPaper00061340:SMD
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:acy-2-F35C5.11
WBPaper00061651:AIZ_enriched
WBPaper00061651:I4_enriched
WBPaper00061651:PQR_enriched
WBPaper00061651:RIB_enriched
WBPaper00061651:SIA_enriched
WBPaper00061651:SIB_enriched
WBPaper00061651:SMD_enriched
WBPaper00061651:VB01_enriched
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065158:AFD_enriched
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065841:22_0
WBPaper00065841:28_0
WBPaper00065841:129_0
WBPaper00065993:glp-1(e2141)_upregulated
cgc4489_group_13
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Embryo_A_Class
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_A_Class
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Serratia_marcesens_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035227:heat_shock_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00037695:LD_DD_6-day
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040876:mir-35_downregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00042548:miRISC_enriched
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00047070:N2_starvation_upregulated
Interaction (13)
Map_infoPositivePositive_cloneC17H12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.23699
MethodGene