WormBase Tree Display for Gene: WBGene00015747

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WBGene00015747	SMap	S_parent	Sequence	C13G5
	Identity	Version	1
		Name	Sequence_name	C13G5.2
			Molecular_name	C13G5.2
				C13G5.2.1
				CE29086
			Other_name	CELE_C13G5.2	Accession_evidence	NDB	BX284603
			Public_name	C13G5.2
		DB_info	Database	AceView	gene	3J706
				WormQTL	gene	WBGene00015747
				WormFlux	gene	WBGene00015747
				NDB	locus_tag	CELE_C13G5.2
				Panther	gene	CAEEL\|WormBase=WBGene00015747\|UniProtKB=P34327
					family	PTHR21525
				NCBI	gene	176208
				RefSeq	protein	NM_066496.5
				SwissProt	UniProtAcc	P34327
				TREEFAM	TREEFAM_ID	TF322639
				UniProt_GCRP	UniProtAcc	P34327
		Species	Caenorhabditis elegans
		History	Version_change	1	28 May 2004 13:30:56	WBPerson1971	Event	Imported	Initial conversion from CDS class of stlace from WS125
		Status	Live
	Gene_info	Biotype	SO:0001217
		Allele (38)
		RNASeq_FPKM (74)
		Contained_in_operon	CEOP3536
		Ortholog (23)
		Paralog	WBGene00015382	Caenorhabditis elegans	From_analysis	TreeFam
						Inparanoid_8
						Panther
						WormBase-Compara
			WBGene00015526	Caenorhabditis elegans	From_analysis	TreeFam
						Panther
						WormBase-Compara
			WBGene00022802	Caenorhabditis elegans	From_analysis	Panther
						WormBase-Compara
		Structured_description	Automated_description	Enriched in germ line; germline precursor cell; head neurons; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	C13G5.2
		Corresponding_transcript	C13G5.2.1
		Other_sequence	CR01500
			CR00853
			CRC05399_1
			CRC01469_1
		Associated_feature	WBsf651293
			WBsf667166
			WBsf667167
			WBsf993413
			WBsf993414
			WBsf227154
	Experimental_info	RNAi_result	WBRNAi00010701	Inferred_automatically	RNAi_primary
			WBRNAi00028853	Inferred_automatically	RNAi_primary
			WBRNAi00005506	Inferred_automatically	RNAi_primary
			WBRNAi00005879	Inferred_automatically	RNAi_primary
			WBRNAi00040459	Inferred_automatically	RNAi_primary
			WBRNAi00040458	Inferred_automatically	RNAi_primary
			WBRNAi00085092	Inferred_automatically	RNAi_primary
		Expr_pattern	Expr1016552
			Expr1036739
			Expr1144523
			Expr2000752
			Expr2018971
		Drives_construct	WBCnstr00028599
		Construct_product	WBCnstr00028599
		Microarray_results (18)
		Expression_cluster	WBPaper00031040:TGF-beta_adult_downregulated
			WBPaper00032031:DConiospora_upregulated_cDNA_12h
			WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
			WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
			WBPaper00037950:bodywall-muscle_L2-larva_expressed
			WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
			WBPaper00037950:coelomocytes_L2-larva_expressed
			WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
			WBPaper00037950:excretory-cell_L2-larva_expressed
			WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
			WBPaper00037950:germline-precursors_embryo_enriched
			WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
			WBPaper00037950:hypodermis_L3-L4-larva_expressed
			WBPaper00037950:intestine_L2-larva_expressed
			WBPaper00038168:lin-15B(n744)_upregulated
			WBPaper00038168:lin-35_upregulated
			WBPaper00044426:rotenone_24h_upregulated
			WBPaper00044656:tatn-1(qd182)_downregulated
			WBPaper00044736:flat_dev_expression
			WBPaper00044760:germline_specific
			WBPaper00045521:Oogenic
			WBPaper00046337:monosomal_N2_vs_daf-2_upregulated
			WBPaper00048611:MnCl2_downregulated
			WBPaper00048988:daf-2(e1370)_downregulated_neuron
			WBPaper00048988:daf-16(mu86)_upregulated_neuron
			WBPaper00048988:neuron_expressed
			WBPaper00049498:npr-1(ur89)_regulated_6
			WBPaper00049545:jmjd-3.1(+)_downregulated
			WBPaper00050488:adult_vs_dauer_regulated_N2_20C
			WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
			WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
			WBPaper00050990:intestine_enriched
			WBPaper00050990:intestine_expressed
			WBPaper00051039:germline_enriched
			WBPaper00052884:emb-4(hc60)_downregulated
			WBPaper00053184:sma-2(rax5)_downregulated
			WBPaper00053184:sma-4(rax3)_downregulated
			WBPaper00053302:zidovudine_72h_regulated
			WBPaper00053321:PGCs_enriched_NuGen
			WBPaper00053388:dauer_regulated_Cluster2
			WBPaper00053599:female_vs_male_upregulated
			WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
			WBPaper00054493:hpl-2(tm1489)_downregulated
			WBPaper00055354:eat-2(ad1116)_upregulated
			WBPaper00055354:Rapamycin-Allantoin_upregulated
			WBPaper00055354:Rifampicin-Allantoin_upregulated
			WBPaper00055482:pmt-2(RNAi)_downregulated
			WBPaper00055648:germline_expressed
			WBPaper00055862:antimycin_damt-1(gk961032)_regulated
			WBPaper00055971:nhl-2(ok818)_25C_upregulated
			WBPaper00056034:pals-22(jy3)_downregulated
			WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
			WBPaper00056139:soil-microbiota_downregulated
			WBPaper00056161:male_enriched_siRNA
			WBPaper00056275:P.aeruginosa_downregulated
			WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
			WBPaper00056275:P.aeruginosa_downregulated_pmk-1(km25)_dependent
			WBPaper00056443:sek-1(km4)_downregulated
			WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
			WBPaper00057154:HeatShock_downregulated_mRNA
			WBPaper00057154:HeatShock_upregulated_miRNA-target
			WBPaper00058598:mex-1(or286)_downregulated
			WBPaper00058598:mex-3(eu149)_downregulated
			WBPaper00058598:sin-3(tm1276)_upregulated
			WBPaper00059567:olrn-1(ums9)_regulated
			WBPaper00059664:srbc-48(ac23)_downregulated
			WBPaper00060014:set-2(tm1630)_upregulated
			WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
			WBPaper00060445:ikb-1(nr2027)_upregulated_L4
			WBPaper00060445:nfki-1(cer1)_upregulated_L4
			WBPaper00060661:sensory-neuron_depleted
			WBPaper00060683:hlh-11(ko1)_downregulated
			WBPaper00060909:atfs-1(cmh15)_upregulated
			WBPaper00061007:HB101_downregulated
			WBPaper00061007:S.aquatilis_downregulated
			WBPaper00061203:sin-3(tm1276)_downregulated
			WBPaper00061203:spr-1(ok2144)_downregulated
			WBPaper00061340:AIZ
			WBPaper00061340:AVJ
			WBPaper00061340:RID
			WBPaper00061527:F54E7.8-orc-5_6376
			WBPaper00061527:T22D1.5-inx-14
			WBPaper00061651:PHso_enriched
			WBPaper00061902:camt-1(ok515)_regulated_RMG
			WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
			WBPaper00062159:hda-2(ok1479)_downregulated
			WBPaper00062325:muscle_depleted_coding-RNA
			WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
			WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
			WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
			WBPaper00064107:lin-35(n745)_upregulated
			WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
			WBPaper00064502:spe-44(fx110)_upregulated
			WBPaper00064532:pals-22(jy3)_upregulated
			WBPaper00064532:pals-25(jy111)_upregulated
			WBPaper00064716:paraquat_upregulated
			WBPaper00065096:25C_vs_20C_upregulated
			WBPaper00065096:Day10_vs_Day1_upregulated
			WBPaper00065984:pals-17(syb3980)_upregulated
			WBPaper00065993:glp-1(e2141)_downregulated
			WBPaper00066038:mip-1(how5)_downregulated
			WBPaper00066110:tetraploid_vs_diploid_downregulated
			WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
			cgc4489_group_2
			WBPaper00025032:cluster_1
			WBPaper00025032:cluster_4
			WBPaper00025099:NI_specific
			WBPaper00025141:N2_Expressed_Genes
			WBPaper00025141:unc-4::GFP_Expressed_Genes
			WBPaper00026929:sir-2.1_overexpression_regulated
			WBPaper00026952:class_B
			WBPaper00026980:intestine_enriched
			WBPaper00027342:alpha-Synuclein(WT)_upregulated
			WBPaper00031003:24hr_muscle_depleted
			WBPaper00031003:total_muscle_depleted
			WBPaper00034739:N2moreDR1350
			WBPaper00034739:RIL17moreRIL14
			WBPaper00035873:dpy-9_regulated
			WBPaper00035873:dpy-10_regulated
			WBPaper00035905:FBF-1_Associated
			WBPaper00036123:Cadmium_regulated
			WBPaper00036130:mir-243_down_regulated
			WBPaper00036286:Pattern_F
			WBPaper00038427:lin-54_embryo_changed
			WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
			WBPaper00040858:eQTL_age_regulated_aging
			WBPaper00040858:eQTL_age_regulated_developing
			WBPaper00040858:eQTL_regulated_juvenile
			WBPaper00040858:eQTL_regulated_old
			WBPaper00040858:eQTL_regulated_reproductive
			WBPaper00040963:TA300_down
			WBPaper00041174:genotypic
			WBPaper00041174:genotypic_prime
			WBPaper00041606:CE_X.nematophila_regulated
			WBPaper00041906:I-3690_vs_OP50_3d
			WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
			WBPaper00045263:0.1mM-paraquat_upregulated
			WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
			WBPaper00048989:N2_rapamycin_downregulated
			WBPaper00053236:Starvation_regulated_GR1307
			WBPaper00053236:Starvation_regulated_N2
			WBPaper00056330:mrps-5(RNAi)_downregulated
			[cgc5767]:cluster_1
			[cgc5767]:expression_class_M
			[cgc5767]:expression_class_MD
			[cgc5767]:expression_class_MD_pd(53_min)
			[cgc5767]:expression_class_SM
			[cgc5767]:expression_class_SMD
			[cgc6390]:Cluster_E
			[cgc6390]:oogenesis-enriched
		Interaction (61)
	Map_info	Positive	Positive_clone	C13G5	Inferred_automatically	From sequence, transcript, pseudogene data
		Interpolated_map_position	III	-0.21995
	Method	Gene