WormBase Tree Display for Gene: WBGene00015526
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| WBGene00015526 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C06E1.11 | |||||||
| Molecular_name | C06E1.11 | ||||||||
| C06E1.11.1 | |||||||||
| CE54089 | |||||||||
| C06E1.11.2 | |||||||||
| Other_name | CELE_C06E1.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C06E1.11 | ||||||||
| DB_info | Database | AceView | gene | 3J702 | |||||
| 3J704 | |||||||||
| WormQTL | gene | WBGene00015526 | |||||||
| WormFlux | gene | WBGene00015526 | |||||||
| NDB | locus_tag | CELE_C06E1.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015526|UniProtKB=P34306 | |||||||
| family | PTHR21525 | ||||||||
| NCBI | gene | 182318 | |||||||
| RefSeq | protein | NM_001392157.1 | |||||||
| SwissProt | UniProtAcc | P34306 | |||||||
| TREEFAM | TREEFAM_ID | TF322639 | |||||||
| UniProt_GCRP | UniProtAcc | P34306 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3536 | ||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00015382 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022802 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015747 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in excretory duct; excretory pore; germ line; germline precursor cell; and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; hsf-1; and nhr-49 based on RNA-seq studies. Is affected by nine chemicals including stavudine; tert-Butylhydroperoxide; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06E1.11 | |||||||
| Corresponding_CDS_history | C06E1.11:wp275 | ||||||||
| Corresponding_transcript | C06E1.11.1 | ||||||||
| C06E1.11.2 | |||||||||
| Other_sequence | CSC02230_1 | ||||||||
| Tcol_isotig19236 | |||||||||
| FD515855.1 | |||||||||
| CBC03261_1 | |||||||||
| CR08286 | |||||||||
| CRC01439_1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005495 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010301 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039884 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026288 | ||||||||
| Expr1143968 | |||||||||
| Expr2000523 | |||||||||
| Expr2018749 | |||||||||
| Drives_construct | WBCnstr00028777 | ||||||||
| Construct_product | WBCnstr00028777 | ||||||||
| Microarray_results | SMD_C06E1.11 | ||||||||
| 176291_at | |||||||||
| Aff_C06E1.11 | |||||||||
| GPL19516_CGZ0002867 | |||||||||
| GPL21109_C06E1.11 | |||||||||
| GPL3518_CE00056 | |||||||||
| GPL8673_C06E1_11P00292 | |||||||||
| GPL8673_C06E1_11P00625 | |||||||||
| Expression_cluster (52) | |||||||||
| Map_info | Positive | Positive_clone | C06E1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.220781 | |||||||
| Method | Gene |
