WormBase Tree Display for Gene: WBGene00015747
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| WBGene00015747 | SMap | S_parent | Sequence | C13G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C13G5.2 | |||||||
| Molecular_name | C13G5.2 | ||||||||
| C13G5.2.1 | |||||||||
| CE29086 | |||||||||
| Other_name | CELE_C13G5.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C13G5.2 | ||||||||
| DB_info | Database | AceView | gene | 3J706 | |||||
| WormQTL | gene | WBGene00015747 | |||||||
| WormFlux | gene | WBGene00015747 | |||||||
| NDB | locus_tag | CELE_C13G5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015747|UniProtKB=P34327 | |||||||
| family | PTHR21525 | ||||||||
| NCBI | gene | 176208 | |||||||
| RefSeq | protein | NM_066496.5 | |||||||
| SwissProt | UniProtAcc | P34327 | |||||||
| TREEFAM | TREEFAM_ID | TF322639 | |||||||
| UniProt_GCRP | UniProtAcc | P34327 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3536 | ||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00015382 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015526 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022802 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; head neurons; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C13G5.2 | |||||||
| Corresponding_transcript | C13G5.2.1 | ||||||||
| Other_sequence | CR01500 | ||||||||
| CR00853 | |||||||||
| CRC05399_1 | |||||||||
| CRC01469_1 | |||||||||
| Associated_feature | WBsf651293 | ||||||||
| WBsf667166 | |||||||||
| WBsf667167 | |||||||||
| WBsf993413 | |||||||||
| WBsf993414 | |||||||||
| WBsf227154 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010701 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028853 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005506 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005879 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040459 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040458 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085092 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016552 | ||||||||
| Expr1036739 | |||||||||
| Expr1144523 | |||||||||
| Expr2000752 | |||||||||
| Expr2018971 | |||||||||
| Drives_construct | WBCnstr00028599 | ||||||||
| Construct_product | WBCnstr00028599 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Positive | Positive_clone | C13G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.21995 | |||||||
| Method | Gene |
