WormBase Tree Display for Gene: WBGene00015217
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| WBGene00015217 | SMap | S_parent | Sequence | B0496 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | tes-1 | Person_evidence | WBPerson240 | |||||
| Sequence_name | B0496.8 | ||||||||
| Molecular_name | B0496.8 | ||||||||
| B0496.8.1 | |||||||||
| CE06720 | |||||||||
| Other_name | tag-224 | Person_evidence | WBPerson201 | ||||||
| CELE_B0496.8 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | tes-1 | ||||||||
| DB_info | Database | AceView | gene | 4I214 | |||||
| WormQTL | gene | WBGene00015217 | |||||||
| WormFlux | gene | WBGene00015217 | |||||||
| NDB | locus_tag | CELE_B0496.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015217|UniProtKB=Q17525 | |||||||
| family | PTHR24211 | ||||||||
| NCBI | gene | 177515 | |||||||
| RefSeq | protein | NM_068789.6 | |||||||
| TREEFAM | TREEFAM_ID | TF313265 | |||||||
| TrEMBL | UniProtAcc | Q17525 | |||||||
| UniProt_GCRP | UniProtAcc | Q17525 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Dec 2004 16:59:41 | WBPerson2970 | Name_change | CGC_name | tag-224 | ||||
| 3 | 23 Nov 2010 16:01:15 | WBPerson2970 | Name_change | CGC_name | tes-1 | ||||
| Other_name | tag-224 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tes | ||||||||
| Allele (27) | |||||||||
| Possibly_affected_by | WBVar02159004 | ||||||||
| Strain | WBStrain00002086 | ||||||||
| WBStrain00035988 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058340 | ||||||||
| 00058341 | |||||||||
| 00121166 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00004112 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022727 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Concise_description | tes-1 encodes an ortholog of Drosophila CG6522-PA and of human LMCD1 and TESTIN; TES-1 is dispensable for Wnt-directed planar cell polarity and the fully asymmetrical division of B.a versus B.p cells. | Paper_evidence | WBPaper00027345 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Dec 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable zinc ion binding activity. Predicted to be located in cytoplasm. Expressed in AB. Human ortholog(s) of this gene implicated in coronary stenosis. Is an ortholog of human LMCD1 (LIM and cysteine rich domains 1) and TES (testin LIM domain protein). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4248 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6633) | ||||
| Molecular_info | Corresponding_CDS | B0496.8 | |||||||
| Corresponding_transcript | B0496.8.1 | ||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf668022 | ||||||||
| WBsf996985 | |||||||||
| WBsf996986 | |||||||||
| WBsf1017714 | |||||||||
| WBsf1017715 | |||||||||
| WBsf1017716 | |||||||||
| WBsf230263 | |||||||||
| WBsf230264 | |||||||||
| WBsf230265 | |||||||||
| WBsf230266 | |||||||||
| Transcription_factor | WBTranscriptionFactor000596 | ||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr5078 | ||||||||
| Expr5079 | |||||||||
| Expr14400 | |||||||||
| Expr16430 | |||||||||
| Expr1019944 | |||||||||
| Expr1036518 | |||||||||
| Expr1143281 | |||||||||
| Expr2017374 | |||||||||
| Expr2035511 | |||||||||
| Drives_construct | WBCnstr00002233 | ||||||||
| WBCnstr00004263 | |||||||||
| WBCnstr00037839 | |||||||||
| Construct_product | WBCnstr00037839 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | IV | Position | 3.33739 | Error | 0.0003 | |||
| Positive | Positive_clone | B0496 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4930 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00027345 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039809 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064685 | |||||||||
| WBPaper00064934 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
