WormBase Tree Display for Gene: WBGene00004112
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WBGene00004112 | SMap | S_parent | Sequence | C46G7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | pqn-22 | Person_evidence | WBPerson625 | |||||
Sequence_name | C46G7.4 | ||||||||
Molecular_name (60) | |||||||||
Other_name | CELE_C46G7.4 | Accession_evidence | NDB | BX284604 | |||||
Public_name | pqn-22 | ||||||||
DB_info | Database | AceView | gene | 4G784 | |||||
WormQTL | gene | WBGene00004112 | |||||||
WormFlux | gene | WBGene00004112 | |||||||
NDB | locus_tag | CELE_C46G7.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004112|UniProtKB=H2KZA3 | |||||||
family | PTHR24211 | ||||||||
NCBI | gene | 177369 | |||||||
RefSeq | protein (20) | ||||||||
TREEFAM | TREEFAM_ID | TF326780 | |||||||
TrEMBL | UniProtAcc (20) | ||||||||
UniProt_GCRP | UniProtAcc | H2KZA3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pqn | ||||||||
Allele (138) | |||||||||
Strain | WBStrain00051164 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00015217 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00022727 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in DB neuron; germ line; and muscle cell based on proteomic; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by seventeen chemicals including methylmercuric chloride; Alovudine; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Zasp-like motif. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS (20) | ||||||||
Corresponding_CDS_history | C46G7.4a:wp236 | ||||||||
C46G7.4b:wp236 | |||||||||
C46G7.4c:wp129 | |||||||||
Corresponding_transcript (20) | |||||||||
Other_sequence (26) | |||||||||
Associated_feature | WBsf996666 | ||||||||
WBsf996667 | |||||||||
WBsf996668 | |||||||||
WBsf996669 | |||||||||
WBsf1017470 | |||||||||
WBsf1017471 | |||||||||
WBsf230126 | |||||||||
WBsf230127 | |||||||||
WBsf230128 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012048 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002033 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042621 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029875 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011414 | ||||||||
Expr1031990 | |||||||||
Expr1146605 | |||||||||
Expr2015039 | |||||||||
Expr2033274 | |||||||||
Drives_construct | WBCnstr00035688 | ||||||||
Construct_product | WBCnstr00035688 | ||||||||
Microarray_results (31) | |||||||||
Expression_cluster (215) | |||||||||
Interaction (25) | |||||||||
Map_info | Map | IV | Position | 2.93941 | Error | 0.002189 | |||
Positive | Positive_clone | C46G7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4900 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064064 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |