WormBase Tree Display for Gene: WBGene00004112
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| WBGene00004112 | SMap | S_parent | Sequence | C46G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-22 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C46G7.4 | ||||||||
| Molecular_name | C46G7.4a | ||||||||
| C46G7.4a.1 | |||||||||
| CE48327 | |||||||||
| C46G7.4b | |||||||||
| CE48297 | |||||||||
| C46G7.4c | |||||||||
| CE37214 | |||||||||
| C46G7.4d | |||||||||
| CE49186 | |||||||||
| C46G7.4e | |||||||||
| CE49474 | |||||||||
| C46G7.4f | |||||||||
| CE49224 | |||||||||
| C46G7.4g | |||||||||
| CE49140 | |||||||||
| C46G7.4h | |||||||||
| CE49401 | |||||||||
| C46G7.4i | |||||||||
| CE49324 | |||||||||
| C46G7.4j | |||||||||
| CE49258 | |||||||||
| C46G7.4k | |||||||||
| CE49166 | |||||||||
| C46G7.4l | |||||||||
| CE49458 | |||||||||
| C46G7.4m | |||||||||
| CE49375 | |||||||||
| C46G7.4n | |||||||||
| CE49278 | |||||||||
| C46G7.4o | |||||||||
| CE49193 | |||||||||
| C46G7.4p | |||||||||
| CE49326 | |||||||||
| C46G7.4q | |||||||||
| CE49250 | |||||||||
| C46G7.4r | |||||||||
| CE49156 | |||||||||
| C46G7.4s | |||||||||
| CE49448 | |||||||||
| C46G7.4t | |||||||||
| CE49359 | |||||||||
| C46G7.4b.1 | |||||||||
| C46G7.4c.1 | |||||||||
| C46G7.4d.1 | |||||||||
| C46G7.4e.1 | |||||||||
| C46G7.4f.1 | |||||||||
| C46G7.4g.1 | |||||||||
| C46G7.4h.1 | |||||||||
| C46G7.4i.1 | |||||||||
| C46G7.4j.1 | |||||||||
| C46G7.4k.1 | |||||||||
| C46G7.4l.1 | |||||||||
| C46G7.4m.1 | |||||||||
| C46G7.4n.1 | |||||||||
| C46G7.4o.1 | |||||||||
| C46G7.4p.1 | |||||||||
| C46G7.4q.1 | |||||||||
| C46G7.4r.1 | |||||||||
| C46G7.4s.1 | |||||||||
| C46G7.4t.1 | |||||||||
| Other_name | CELE_C46G7.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pqn-22 | ||||||||
| DB_info | Database | AceView | gene | 4G784 | |||||
| WormQTL | gene | WBGene00004112 | |||||||
| WormFlux | gene | WBGene00004112 | |||||||
| NDB | locus_tag | CELE_C46G7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004112|UniProtKB=H2KZA3 | |||||||
| family | PTHR24211 | ||||||||
| NCBI | gene | 177369 | |||||||
| RefSeq | protein (20) | ||||||||
| TREEFAM | TREEFAM_ID | TF326780 | |||||||
| TrEMBL | UniProtAcc (20) | ||||||||
| UniProt_GCRP | UniProtAcc | H2KZA3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (138) | |||||||||
| Strain | WBStrain00051164 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00015217 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022727 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in DB neuron; germ line; and muscle cell based on proteomic; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by seventeen chemicals including methylmercuric chloride; Alovudine; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Zasp-like motif. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (20) | ||||||||
| Corresponding_CDS_history | C46G7.4a:wp236 | ||||||||
| C46G7.4b:wp236 | |||||||||
| C46G7.4c:wp129 | |||||||||
| Corresponding_transcript (20) | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf996666 | ||||||||
| WBsf996667 | |||||||||
| WBsf996668 | |||||||||
| WBsf996669 | |||||||||
| WBsf1017470 | |||||||||
| WBsf1017471 | |||||||||
| WBsf230126 | |||||||||
| WBsf230127 | |||||||||
| WBsf230128 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012048 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002033 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042621 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029875 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011414 | ||||||||
| Expr1031990 | |||||||||
| Expr1146605 | |||||||||
| Expr2015039 | |||||||||
| Expr2033274 | |||||||||
| Drives_construct | WBCnstr00035688 | ||||||||
| Construct_product | WBCnstr00035688 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (215) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | IV | Position | 2.93941 | Error | 0.002189 | |||
| Positive | Positive_clone | C46G7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4900 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064064 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
