WormBase Tree Display for Gene: WBGene00015061

WBGene00015061 SMap: S_parent: Sequence: B0228
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: cpna
    Allele (381)
    Strain: WBStrain00036140
      WBStrain00037963
    RNASeq_FPKM (74)
    GO_annotation: 00052927
      00052928
      00052929
    Ortholog (24)
    Paralog: WBGene00001577 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006441 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006495 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007044 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007221 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012128 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: cpna-2 encodes proteins with similarity to several InterPro domains including those of polycystin cation channels, von Willebrand factor, the DNA recombination repair protein BRCA2, protein-tyrosine phosphatase, non-receptor type-13, glyoxylate carboligase, and copines, Ca2+-dependent phosphatidylserine binding proteins; cpna-2::gfp reporter fusions are expressed in body wall muscle. Paper_evidence: WBPaper00026677
          Curator_confirmed: WBPerson1843
          Date_last_updated: 14 Dec 2009 00:00:00
      Automated_description: Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in protein ubiquitination. Predicted to be located in nucleus. Expressed in body wall musculature; muscle cell; and pharyngeal muscle cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0228.4a
      B0228.4c
      B0228.4d
      B0228.4e
    Corresponding_CDS_history: B0228.4b:wp130
      B0228.4b:wp214
      B0228.4c:wp130
    Corresponding_transcript: B0228.4a.1
      B0228.4c.1
      B0228.4d.1
      B0228.4e.1
    Other_sequence (45)
    Associated_feature (18)
  Experimental_info: RNAi_result: WBRNAi00038764 Inferred_automatically: RNAi_primary
      WBRNAi00009607 Inferred_automatically: RNAi_primary
      WBRNAi00038763 Inferred_automatically: RNAi_primary
      WBRNAi00038762 Inferred_automatically: RNAi_primary
      WBRNAi00009606 Inferred_automatically: RNAi_primary
      WBRNAi00009605 Inferred_automatically: RNAi_primary
      WBRNAi00001063 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1418
      Expr89
      Expr3676
      Expr5023
      Expr5024
      Expr1024361
      Expr1036435
      Expr1142973
      Expr2010498
      Expr2028738
    Drives_construct: WBCnstr00002140
      WBCnstr00004234
      WBCnstr00011592
    Microarray_results (50)
    Expression_cluster (208)
    Interaction: WBInteraction000371459
      WBInteraction000386094
      WBInteraction000396907
      WBInteraction000565486
      WBInteraction000576746
      WBInteraction000578440
      WBInteraction000583916
      WBInteraction000584201
  Map_info: Map: II Position: 0.55876 Error: 0.003674
    Positive: Positive_clone: B0228 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5147
        4221
        4530
        5562
    Pseudo_map_position
  Reference: WBPaper00026677
    WBPaper00039197
    WBPaper00041771
    WBPaper00055090
    WBPaper00060839
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
  Method: Gene