WormBase Tree Display for Gene: WBGene00015007
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WBGene00015007 | SMap | S_parent | Sequence | B0041 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ain-2 | Paper_evidence | WBPaper00031252 | |||
Person_evidence | WBPerson237 | ||||||
Sequence_name | B0041.2 | ||||||
Molecular_name (22) | |||||||
Other_name | CELE_B0041.2 | Accession_evidence | NDB | BX284601 | |||
Public_name | ain-2 | ||||||
DB_info | Database | AceView | gene | 1F227 | |||
WormQTL | gene | WBGene00015007 | |||||
WormFlux | gene | WBGene00015007 | |||||
NDB | locus_tag | CELE_B0041.2 | |||||
NCBI | gene | 172076 | |||||
RefSeq | protein | NM_001379884.1 | |||||
NM_001356820.2 | |||||||
NM_001392189.1 | |||||||
NM_001356823.4 | |||||||
NM_001356822.4 | |||||||
NM_001379889.3 | |||||||
NM_001025786.5 | |||||||
TREEFAM | TREEFAM_ID | TF350152 | |||||
TrEMBL | UniProtAcc | A0A2C9C2E8 | |||||
A0A2C9C358 | |||||||
H2KY59 | |||||||
Q95R18 | |||||||
H2KY58 | |||||||
H2KY60 | |||||||
A0A2C9C2L0 | |||||||
UniProt_GCRP | UniProtAcc | H2KY58 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ain | ||||||
Allele (108) | |||||||
Strain | WBStrain00026535 | ||||||
WBStrain00054872 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00021370 | ||||||
00021371 | |||||||
00021372 | |||||||
00021373 | |||||||
Ortholog (23) | |||||||
Structured_description | Concise_description | ain-2 encodes, by alternative splicing, three isoforms of anunfamiliar protein paralogous to AIN-1, and homologous to Brugia malayi14748.m00068, 14052.m00191, and 14963.m01790; AIN-2 protein bindsGEI-4 and GEI-16 in yeast two-hybrid experiments; AIN-2 and itsnematode homologs have weak similarity to human TNRC6A (GW182;OMIM:610739) and Drosophila GAWKY; ain-2 has no obvious function inmass RNAi assays. | Paper_evidence | WBPaper00006332 | |||
WBPaper00026707 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 15 Jul 2009 00:00:00 | ||||||
Automated_description | Involved in negative regulation of gene expression; regulation of cell fate specification; and regulation of development, heterochronic. Expressed widely. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | B0041.2a | |||||
B0041.2b | |||||||
B0041.2c | |||||||
B0041.2d | |||||||
B0041.2e | |||||||
B0041.2f | |||||||
B0041.2g | |||||||
Corresponding_CDS_history | B0041.2b:wp93 | ||||||
B0041.2b:wp261 | |||||||
B0041.2c:wp224 | |||||||
Corresponding_transcript | B0041.2a.1 | ||||||
B0041.2a.2 | |||||||
B0041.2b.1 | |||||||
B0041.2c.1 | |||||||
B0041.2d.1 | |||||||
B0041.2e.1 | |||||||
B0041.2f.1 | |||||||
B0041.2g.1 | |||||||
Other_sequence | CRC03536_1 | ||||||
CRC04330_1 | |||||||
CBC12396_1 | |||||||
CR10521 | |||||||
CR12291 | |||||||
Associated_feature | WBsf656239 | ||||||
WBsf656240 | |||||||
WBsf656241 | |||||||
WBsf983457 | |||||||
WBsf983458 | |||||||
WBsf1009690 | |||||||
WBsf1009691 | |||||||
WBsf217558 | |||||||
WBsf217559 | |||||||
WBsf217560 | |||||||
Experimental_info | RNAi_result | WBRNAi00069760 | Inferred_automatically | RNAi_primary | |||
WBRNAi00002827 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078265 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038690 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00069761 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038686 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr7851 | ||||||
Expr10993 | |||||||
Expr13424 | |||||||
Expr1010251 | |||||||
Expr1036414 | |||||||
Expr1142893 | |||||||
Expr2009273 | |||||||
Expr2027510 | |||||||
Drives_construct | WBCnstr00004972 | ||||||
WBCnstr00017844 | |||||||
WBCnstr00029164 | |||||||
WBCnstr00039525 | |||||||
Construct_product | WBCnstr00004972 | ||||||
WBCnstr00017844 | |||||||
WBCnstr00029164 | |||||||
WBCnstr00039525 | |||||||
Regulate_expr_cluster | WBPaper00031252:AIN-2_IP_enriched | ||||||
WBPaper00035084:embryo_enriched_AIN-2_IP | |||||||
WBPaper00035084:L1_enriched_AIN-2_IP | |||||||
WBPaper00035084:L2_enriched_AIN-2_IP | |||||||
WBPaper00035084:L3_enriched_AIN-2_IP | |||||||
WBPaper00035084:L4_enriched_AIN-2_IP | |||||||
WBPaper00040985:AIN-2_asynchronous_intestine | |||||||
WBPaper00040985:AIN-2_asynchronous_muscle | |||||||
WBPaper00040985:AIN-2_L4_intestine | |||||||
WBPaper00042548:miRISC_enriched | |||||||
Antibody | WBAntibody00002712 | ||||||
Microarray_results (39) | |||||||
Expression_cluster (118) | |||||||
Interaction (50) | |||||||
Map_info | Map | I | Position | -1.02852 | Error | 0.002242 | |
Positive | Positive_clone | B0041 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (19) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |