WormBase Tree Display for Gene: WBGene00014666
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| WBGene00014666 | SMap | S_parent | Sequence | C05D12 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C05D12.3 | ||||||||
| Molecular_name | C05D12.3a | |||||||||
| C05D12.3a.1 | ||||||||||
| CE36974 | ||||||||||
| C05D12.3c | ||||||||||
| CE39469 | ||||||||||
| C05D12.3b | ||||||||||
| C05D12.3c.1 | ||||||||||
| C05D12.3c.2 | ||||||||||
| C05D12.3c.3 | ||||||||||
| Other_name | CELE_C05D12.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | C05D12.3 | |||||||||
| DB_info | Database | AceView | gene | 2L721C | ||||||
| WormFlux | gene | WBGene00014666 | ||||||||
| NDB | locus_tag | CELE_C05D12.3 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00014666|UniProtKB=Q6A4V9 | ||||||||
| family | PTHR47324 | |||||||||
| NCBI | gene | 174742 | ||||||||
| RefSeq | protein | NM_001381606.2 | ||||||||
| NM_001381605.1 | ||||||||||
| NR_003151.1 | ||||||||||
| TREEFAM | TREEFAM_ID | TF320379 | ||||||||
| TrEMBL | UniProtAcc | Q2PJ78 | ||||||||
| Q6A4V9 | ||||||||||
| UniProt_GCRP | UniProtAcc | Q6A4V9 | ||||||||
| RNAcentral | URSid | URS00005A99CB | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 27 May 2004 15:23:24 | WBPerson1971 | Event | Imported | Initial conversion from Pseudogene class of WS125 | |||
| 2 | 13 Jul 2004 16:42:22 | WBPerson1983 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (102) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (19) | ||||||||||
| Paralog | WBGene00007340 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | ||||||||||
| WormBase-Compara | ||||||||||
| WBGene00012018 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00018237 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00022858 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00019957 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00021233 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; intestine; and neurons based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; microarray; and proteomic studies. Is affected by twenty-eight chemicals including nicotinic acid; Tunicamycin; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: von Willebrand factor A-like domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | C05D12.3a | ||||||||
| C05D12.3c | ||||||||||
| Corresponding_transcript | C05D12.3b | |||||||||
| C05D12.3a.1 | ||||||||||
| C05D12.3c.1 | ||||||||||
| C05D12.3c.2 | ||||||||||
| C05D12.3c.3 | ||||||||||
| Corresponding_pseudogene_history | C05D12.3:wp128 | |||||||||
| Other_sequence | CJC17511_1 | |||||||||
| Associated_feature | WBsf658243 | |||||||||
| WBsf989756 | ||||||||||
| WBsf989757 | ||||||||||
| WBsf222135 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00028500 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00010203 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00039745 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr1016541 | |||||||||
| Expr1036398 | ||||||||||
| Expr1143836 | ||||||||||
| Expr2000467 | ||||||||||
| Expr2018690 | ||||||||||
| Drives_construct | WBCnstr00029181 | |||||||||
| Construct_product | WBCnstr00029181 | |||||||||
| Microarray_results | SMD_C05D12.4 | |||||||||
| 175077_s_at | ||||||||||
| 181542_at | ||||||||||
| A_12_P112595 | ||||||||||
| A_12_P135110 | ||||||||||
| Aff_C05D12.4 | ||||||||||
| GPL13394_WBGene00014666 | ||||||||||
| GPL13914_C05D12.3 | ||||||||||
| GPL14144_C05D12.3a_2907-2966_0.959_5_A | ||||||||||
| GPL14144_C05D12.4_737-796_0.940_1_A | ||||||||||
| GPL19516_CGZ0002595 | ||||||||||
| GPL19516_CGZ0002596 | ||||||||||
| GPL19516_CGZ0002597 | ||||||||||
| GPL19516_CGZ0002598 | ||||||||||
| GPL19516_CGZ0002599 | ||||||||||
| GPL19516_CGZ0002600 | ||||||||||
| GPL21109_C05D12.3a.1 | ||||||||||
| GPL21109_C05D12.3c.1 | ||||||||||
| GPL21109_C05D12.4 | ||||||||||
| GPL3518_CE02972 | ||||||||||
| GPL8304_CE_WBGene00007341_A | ||||||||||
| GPL8304_CE_WBGene00007341_C | ||||||||||
| GPL8304_CE_WBGene00014666_A | ||||||||||
| GPL8304_CE_WBGene00014666_B | ||||||||||
| GPL8673_C05D12_3aP02136 | ||||||||||
| GPL8673_C05D12_3aP02989 | ||||||||||
| GPL8673_C05D12_3aP03030 | ||||||||||
| GPL8673_C05D12_3cP02136 | ||||||||||
| GPL8673_C05D12_3cP02482 | ||||||||||
| GPL8673_C05D12_3cP02898 | ||||||||||
| GPL8673_C05D12_4P00032 | ||||||||||
| GPL8673_C05D12_4P00480 | ||||||||||
| GPL8673_C05D12_4P00622 | ||||||||||
| GPL9450_C05D12.4 | ||||||||||
| cea2.p.29264 | ||||||||||
| Expression_cluster (240) | ||||||||||
| Map_info | Positive | Positive_clone | C05D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | 3.46547 | ||||||||
| Method | Gene |
