WormBase Tree Display for Gene: WBGene00013997

WBGene00013997 SMap: S_parent: Sequence: ZK550
  Identity: Version: 2
    Name: CGC_name: eelo-2 Person_evidence: WBPerson6609
            WBPerson1816
      Sequence_name: ZK550.3
      Molecular_name: ZK550.3
        ZK550.3.1
        CE37464
      Other_name: CELE_ZK550.3 Accession_evidence: NDB BX284604
      Public_name: eelo-2
    DB_info: Database: AceView gene 4S197
        WormQTL gene WBGene00013997
        WormFlux gene WBGene00013997
        NDB locus_tag CELE_ZK550.3
        Panther gene CAEEL|WormBase=WBGene00013997|UniProtKB=O62512
          family PTHR11804
        NCBI gene 178501
        RefSeq protein NM_070658.8
        TREEFAM TREEFAM_ID TF351383
        TrEMBL UniProtAcc O62512
        UniProt_GCRP UniProtAcc O62512
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 May 2023 12:43:53 WBPerson51134 Name_change: CGC_name: eelo-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eelo
    Allele (104)
    Strain: WBStrain00037792
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP4600
    Ortholog (37)
    Paralog: WBGene00013464 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of human THOP1 (thimet oligopeptidase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK550.3
    Corresponding_CDS_history: ZK550.3:wp99
      ZK550.3:wp131
    Corresponding_transcript: ZK550.3.1
    Other_sequence (47)
    Associated_feature: WBsf646601
      WBsf660979
      WBsf229619
  Experimental_info: RNAi_result: WBRNAi00059513 Inferred_automatically: RNAi_primary
      WBRNAi00001542 Inferred_automatically: RNAi_primary
      WBRNAi00038337 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021244
      Expr1036255
      Expr1162930
      Expr2008873
      Expr2027106
    Microarray_results (19)
    Expression_cluster: WBPaper00032528:L3_enriched
      WBPaper00035073:mitochondria_protein
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038168:lin-35_downregulated
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040965:lipid-droplet_associated_protein
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00050199:hsf-1(ok600)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050698:DEP-1_interacting
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:body-wall-muscle_nucleus_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00051265:F1_morc-1(tm6048)_downregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056034:pals-25(jy9)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056293:rpl-5(0)-rpl-33(0)_downregulated
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00059194:KLF-1_interacting
      WBPaper00059254:CSR-1_interacting
      WBPaper00059254:PRG-1_interacting
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061340:pm7
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:atad-3-mpst-1
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062590:Aging_downregulated_hypodermis
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064315:mes-4(bn73)_downregulated_EGCs
      WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065258:anchor-cell_depleted
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_2_6
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026980:intestine_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_G
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00040210:Chlorpyrifos_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HF_11d_2.0mM_Up
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(186_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(41_min)
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_ME
    Interaction (90)
  Map_info: Map: IV Position: 16.2839
    Positive: Positive_clone: ZK550 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034598
    WBPaper00036249
    WBPaper00038491
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene