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WormBase Tree Display for Gene: WBGene00013694

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Name Class

WBGene00013694SMapS_parentSequenceY106G6A
IdentityVersion2
NameCGC_namemekk-3
Sequence_nameY106G6A.1
Molecular_nameY106G6A.1
Y106G6A.1.1
CE19294
Other_nameCELE_Y106G6A.1Accession_evidenceNDBBX284601
Public_namemekk-3
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 May 2019 14:10:26WBPerson1983Name_changeCGC_namemekk-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmekk
Allele (27)
StrainWBStrain00032412
RNASeq_FPKM (74)
GO_annotation00103749
00103750
00103751
00103752
00103753
00120506
00120507
00120508
Contained_in_operonCEOP1568
Ortholog (69)
Paralog (13)
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine kinase activity. Predicted to be involved in phosphorylation. Located in sarcoplasmic reticulum.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY106G6A.1
Corresponding_transcriptY106G6A.1.1
Other_sequenceCJC07444_1
CBC17761_1
Associated_feature (15)
Experimental_infoRNAi_resultWBRNAi00022465Inferred_automaticallyRNAi_primary
WBRNAi00036509Inferred_automaticallyRNAi_primary
WBRNAi00055245Inferred_automaticallyRNAi_primary
WBRNAi00004488Inferred_automaticallyRNAi_primary
Expr_patternExpr9423
Expr1020041
Expr1036123
Expr1158785
Expr2006981
Expr2025203
Drives_constructWBCnstr00029562
Construct_productWBCnstr00013988
WBCnstr00029562
Microarray_results (20)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040560:hpl-2_embryo_upregulated
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00059194:KLF-1_interacting
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00061340:Neuroblast_AVG_RIR
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:chn-1_12866-rab-21
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4489_group_5
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00038427:lin-54_embryo_changed
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
InteractionWBInteraction000365300
Map_infoMapIPosition4.07614
PositivePositive_cloneY106G6AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027258
WBPaper00038444
WBPaper00057481
WBPaper00062822
WBPaper00064766
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene