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WormBase Tree Display for Gene: WBGene00013587

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Name Class

WBGene00013587SMapS_parentSequenceY80D3A
IdentityVersion2
NameCGC_namehrg-10Person_evidenceWBPerson15737
Sequence_nameY80D3A.9
Molecular_nameY80D3A.9
Y80D3A.9.1
CE24678
Other_nameCELE_Y80D3A.9Accession_evidenceNDBBX284605
Public_namehrg-10
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
211 Mar 2021 09:37:10WBPerson1983Name_changeCGC_namehrg-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhrg
Allele (128)
RNASeq_FPKM (74)
GO_annotation00098294
00098295
00098296
Contained_in_operonCEOP5476
CEOP5578
Ortholog (39)
ParalogWBGene00011305Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in Golgi organization and protein secretion. Predicted to be located in Golgi apparatus. Expressed in hypodermis. Is an ortholog of human TANGO2 (transport and golgi organization 2 homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0081386Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25439)
Molecular_infoCorresponding_CDSY80D3A.9
Corresponding_transcriptY80D3A.9.1
Other_sequenceMH10507
MH04728
MI00091
CBC04752_1
OF00077
MI01118
MH06227
MI03938
Associated_featureWBsf235199
Experimental_infoRNAi_resultWBRNAi00037893Inferred_automaticallyRNAi_primary
WBRNAi00058557Inferred_automaticallyRNAi_primary
Expr_patternExpr16357
Expr16359
Expr1019369
Expr1036076
Expr1161960
Expr2008460
Expr2026701
Drives_constructWBCnstr00042973
WBCnstr00042974
Construct_productWBCnstr00042974
Microarray_results (17)
Expression_clusterWBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-35_downregulated
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
WBPaper00048923:Aging_regulated
WBPaper00048952:glucose_induced
WBPaper00048988:neuron_expressed
WBPaper00049134:hpk-1(pk1393)_downregulated
WBPaper00049266:NaAsO2-Stress_regulated_N2
WBPaper00049334:CE_intestine_enriched
WBPaper00049484:elt-2(RNAi)_downregulated_L1
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_downregulated
WBPaper00049905:Age_variant_expression
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050990:arcade_intestinal-valve_enriched
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053792:Ochrobactrum_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:flcn-1(ok975)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:hmc_biased
WBPaper00057288:Cold_downregulated_protein
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00059191:hsp-16.2p-LIN-29_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059895:wounding_downregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060634:fhod-1(tm2363)_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00060911:prx-5(RNAi)_upregulated_protein
WBPaper00061007:HB101_downregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:RIA_parent
WBPaper00061340:RMED
WBPaper00061527:F31C3.4_6048-cutc-1_15804
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061995:mter-4(syb3662syb3403)_upregulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062590:Aging_downregulated_hypodermis
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064315:mes-3(bn199)_downregulated_PGCs
WBPaper00064315:mes-4(bn73)_downregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065373:sek-1(km4)_downregulated_Ref
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00025032:cluster_1
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00034739:N2lessDR1350
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_F
WBPaper00037147:heatshock_upregulated
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00040998:nhr-66_regulated
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_N2
WBPaper00055899:nitrotriazolone_regulated
WBPaper00057098:SiO2-nanoparticles_downregulated
InteractionWBInteraction000206297
WBInteraction000297835
WBInteraction000453460
WBInteraction000465888
Map_infoPositivePositive_cloneY80D3AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV18.4694
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064607
MethodGene