WormBase Tree Display for Gene: WBGene00013311
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| WBGene00013311 | SMap | S_parent | Sequence | Y57G11C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | sec-61.A | Person_evidence | WBPerson1983 | |||||
| Sequence_name | Y57G11C.15 | ||||||||
| Molecular_name | Y57G11C.15a | ||||||||
| Y57G11C.15a.1 | |||||||||
| CE14954 | |||||||||
| Y57G11C.15b | |||||||||
| CE46476 | |||||||||
| Y57G11C.15b.1 | |||||||||
| Other_name | sec-61 | ||||||||
| CELE_Y57G11C.15 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | sec-61.A | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | sec-61 | ||||
| 3 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | sec-61.A | ||||
| Other_name | sec-61 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sec | ||||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (58) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein transmembrane transporter activity; ribosome binding activity; and signal sequence binding activity. Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, translocation and post-translational protein targeting to membrane, translocation. Predicted to be located in membrane. Predicted to be part of Sec61 translocon complex. Human ortholog(s) of this gene implicated in familial juvenile hyperuricemic nephropathy. Is an ortholog of human SEC61A1 (SEC61 translocon subunit alpha 1) and SEC61A2 (SEC61 translocon subunit alpha 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060062 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18276) | ||||
| Molecular_info | Corresponding_CDS | Y57G11C.15a | |||||||
| Y57G11C.15b | |||||||||
| Corresponding_transcript | Y57G11C.15a.1 | ||||||||
| Y57G11C.15b.1 | |||||||||
| Other_sequence (346) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00117219 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000312 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022997 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000220 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085592 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057687 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013952 | ||||||||
| Expr1035938 | |||||||||
| Expr1161099 | |||||||||
| Expr2015719 | |||||||||
| Expr2033951 | |||||||||
| Drives_construct | WBCnstr00029694 | ||||||||
| Construct_product | WBCnstr00029694 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (213) | |||||||||
| Interaction (171) | |||||||||
| Map_info | Map | IV | Position | 12.5297 | |||||
| Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031214 | ||||||||
| WBPaper00032322 | |||||||||
| WBPaper00033545 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
