WormBase Tree Display for Gene: WBGene00013219
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| WBGene00013219 | SMap | S_parent | Sequence | Y54G11A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | elof-1 | |||||||
| Sequence_name | Y54G11A.11 | ||||||||
| Molecular_name | Y54G11A.11 | ||||||||
| Y54G11A.11.1 | |||||||||
| CE22483 | |||||||||
| Y54G11A.11.2 | |||||||||
| Other_name | CELE_Y54G11A.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | elof-1 | ||||||||
| DB_info | Database | AceView | gene | 2O637 | |||||
| WormQTL | gene | WBGene00013219 | |||||||
| WormFlux | gene | WBGene00013219 | |||||||
| NDB | locus_tag | CELE_Y54G11A.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013219|UniProtKB=Q9XVZ8 | |||||||
| family | PTHR20934 | ||||||||
| NCBI | gene | 175090 | |||||||
| RefSeq | protein | NM_064582.10 | |||||||
| SwissProt | UniProtAcc | Q9XVZ8 | |||||||
| TREEFAM | TREEFAM_ID | TF313731 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVZ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Jun 2020 11:44:25 | WBPerson1983 | Name_change | CGC_name | elof-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elof | ||||||||
| Allele (23) | |||||||||
| Possibly_affected_by | WBVar02154114 | ||||||||
| Strain | WBStrain00049418 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102952 | ||||||||
| 00102953 | |||||||||
| 00102954 | |||||||||
| 00102955 | |||||||||
| 00102956 | |||||||||
| 00102957 | |||||||||
| 00102958 | |||||||||
| 00102959 | |||||||||
| 00102960 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II complex binding activity. Predicted to be involved in transcription elongation by RNA polymerase II. Located in nucleolus. Is an ortholog of human ELOF1 (elongation factor 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G11A.11 | |||||||
| Corresponding_transcript | Y54G11A.11.1 | ||||||||
| Y54G11A.11.2 | |||||||||
| Other_sequence (56) | |||||||||
| Associated_feature | WBsf644842 | ||||||||
| WBsf981361 | |||||||||
| WBsf222445 | |||||||||
| WBsf222446 | |||||||||
| WBsf222447 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037484 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062451 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057423 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020984 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9475 | ||||||||
| Expr1015378 | |||||||||
| Expr1035879 | |||||||||
| Expr1160857 | |||||||||
| Expr2007921 | |||||||||
| Expr2026163 | |||||||||
| Drives_construct | WBCnstr00029725 | ||||||||
| Construct_product | WBCnstr00014040 | ||||||||
| WBCnstr00029725 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Positive | Positive_clone | Y54G11A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 22.9082 | |||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061904 | |||||||||
| Method | Gene |
