WormBase Tree Display for Gene: WBGene00012977
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| WBGene00012977 | SMap | S_parent | Sequence | Y48A6C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y48A6C.4 | |||||||
| Molecular_name | Y48A6C.4 | ||||||||
| Y48A6C.4.1 | |||||||||
| CE43502 | |||||||||
| Other_name | CELE_Y48A6C.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y48A6C.4 | ||||||||
| DB_info | Database | AceView | gene | 3M213 | |||||
| WormQTL | gene | WBGene00012977 | |||||||
| WormFlux | gene | WBGene00012977 | |||||||
| NDB | locus_tag | CELE_Y48A6C.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012977|UniProtKB=Q9XWK5 | |||||||
| family | PTHR16056 | ||||||||
| NCBI | gene | 190016 | |||||||
| RefSeq | protein | NM_067032.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318197 | |||||||
| TrEMBL | UniProtAcc | Q9XWK5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWK5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (96) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103625 | ||||||||
| 00103626 | |||||||||
| 00103627 | |||||||||
| 00103628 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00007190 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007786 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009369 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011501 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012976 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015855 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020070 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | Y48A6C.4 encodes an ortholog of S. cerevisiae IPI1 that may suppress tumorous growth in the germ line by ensuring robust larval germline proliferation; like PRO-1, -2, and -3, Y48A6C.4 is probably required for ribosome biogenesis, suggesting a link between biogenesis in the distal sheath and control of cell division in the germ line. | Paper_evidence | WBPaper00028280 | |||||
| WBPaper00028929 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 23 Apr 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be located in nucleus. Predicted to be part of MLL1 complex. Is an ortholog of human TEX10 (testis expressed 10). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48A6C.4 | |||||||
| Corresponding_CDS_history | Y48A6C.4:wp200 | ||||||||
| Corresponding_transcript | Y48A6C.4.1 | ||||||||
| Other_sequence | GR978404.1 | ||||||||
| Hbac_isotig02411 | |||||||||
| JI174502.1 | |||||||||
| CBC08125_1 | |||||||||
| SC00846 | |||||||||
| CJC09707_1 | |||||||||
| HBC16354_1 | |||||||||
| EX914738.1 | |||||||||
| Associated_feature | WBsf645601 | ||||||||
| WBsf994276 | |||||||||
| WBsf994277 | |||||||||
| WBsf1015929 | |||||||||
| WBsf1015930 | |||||||||
| WBsf225794 | |||||||||
| WBsf225795 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006365 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009350 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026750 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071666 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071364 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002637 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056871 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037226 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021678 | ||||||||
| Expr1035755 | |||||||||
| Expr1160323 | |||||||||
| Expr2007653 | |||||||||
| Expr2025893 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction | WBInteraction000040356 | ||||||||
| WBInteraction000044341 | |||||||||
| WBInteraction000044345 | |||||||||
| WBInteraction000044354 | |||||||||
| WBInteraction000044359 | |||||||||
| WBInteraction000046099 | |||||||||
| WBInteraction000048561 | |||||||||
| WBInteraction000240606 | |||||||||
| WBInteraction000297044 | |||||||||
| Map_info | Positive | Positive_clone | Y48A6C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 6.07936 | |||||||
| Reference | WBPaper00028280 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
