WormBase Tree Display for Gene: WBGene00007786
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| WBGene00007786 | SMap | S_parent | Sequence | C27H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rmd-2 | Person_evidence | WBPerson2692 | |||||
| WBPerson552 | |||||||||
| Sequence_name | C27H6.4 | ||||||||
| Molecular_name | C27H6.4a | ||||||||
| C27H6.4a.1 | |||||||||
| CE08428 | |||||||||
| C27H6.4b | |||||||||
| CE45113 | |||||||||
| C27H6.4c | |||||||||
| CE42479 | |||||||||
| C27H6.4b.1 | |||||||||
| C27H6.4c.1 | |||||||||
| Other_name | CELE_C27H6.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rmd-2 | ||||||||
| DB_info | Database | AceView | gene | 5K464 | |||||
| WormQTL | gene | WBGene00007786 | |||||||
| WormFlux | gene | WBGene00007786 | |||||||
| NDB | locus_tag | CELE_C27H6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007786|UniProtKB=Q8MQB5 | |||||||
| family | PTHR16056 | ||||||||
| NCBI | gene | 179391 | |||||||
| RefSeq | protein | NM_171523.6 | |||||||
| NM_001129394.5 | |||||||||
| NM_171522.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF315854 | |||||||
| TrEMBL | UniProtAcc | Q8MQB5 | |||||||
| B2D6P1 | |||||||||
| P90762 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MQB5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Nov 2007 10:25:06 | WBPerson2970 | Name_change | CGC_name | rmd-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rmd | ||||||||
| Allele (34) | |||||||||
| Possibly_affected_by | WBVar02154061 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005821 | ||||||||
| 00005822 | |||||||||
| 00005823 | |||||||||
| 00005824 | |||||||||
| 00005825 | |||||||||
| 00005826 | |||||||||
| 00084529 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00007190 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012976 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012977 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009369 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011501 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015855 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018125 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020711 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020070 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable microtubule binding activity. Predicted to be located in mitochondrion; mitotic spindle pole; and spindle microtubule. Is an ortholog of human RMDN2 (regulator of microtubule dynamics 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27H6.4a | |||||||
| C27H6.4b | |||||||||
| C27H6.4c | |||||||||
| Corresponding_CDS_history | C27H6.4:wp82 | ||||||||
| C27H6.4b:wp215 | |||||||||
| Corresponding_transcript | C27H6.4a.1 | ||||||||
| C27H6.4b.1 | |||||||||
| C27H6.4c.1 | |||||||||
| Other_sequence (70) | |||||||||
| Associated_feature | WBsf652954 | ||||||||
| WBsf652955 | |||||||||
| WBsf1001030 | |||||||||
| WBsf1001031 | |||||||||
| WBsf1020252 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041383 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00081133 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011282 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022284 | ||||||||
| Expr1033379 | |||||||||
| Expr1145417 | |||||||||
| Expr2015371 | |||||||||
| Expr2033605 | |||||||||
| Drives_construct | WBCnstr00033483 | ||||||||
| Construct_product | WBCnstr00033483 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000250493 | ||||||||
| WBInteraction000551421 | |||||||||
| WBInteraction000571076 | |||||||||
| WBInteraction000571116 | |||||||||
| WBInteraction000576556 | |||||||||
| WBInteraction000577838 | |||||||||
| WBInteraction000580558 | |||||||||
| Map_info | Map | V | Position | 2.22625 | Error | 0.000679 | |||
| Positive | Positive_clone | C27H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034662 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056909 | |||||||||
| WBPaper00061639 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
