WormBase Tree Display for Gene: WBGene00012604
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WBGene00012604 | SMap | S_parent | Sequence | Y38E10A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nspe | |||||
Allele (12) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (63) | ||||||
Paralog | WBGene00012587 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012589 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012590 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012591 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012593 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012594 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012603 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00175028 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including MSaapapa; MSpapapa; arcade cell; germline precursor cell; and pharyngeal-intestinal valve cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by thirty-two chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y38E10A.26 | ||||
Corresponding_transcript | Y38E10A.26.1 | |||||
Associated_feature | WBsf650662 | |||||
WBsf224085 | ||||||
Experimental_info | Expr_pattern | Expr1022879 | ||||
Expr1159544 | ||||||
Expr2014488 | ||||||
Expr2032727 | ||||||
Drives_construct | WBCnstr00029887 | |||||
Construct_product | WBCnstr00029887 | |||||
Microarray_results | 186726_at | |||||
A_12_P117900 | ||||||
GPL14144_Y38E10A.26_63-122_0.669_4_A | ||||||
GPL19516_CGZ0044582 | ||||||
GPL21109_Y38E10A.26 | ||||||
GPL8304_CE_WBGene00012604_A | ||||||
GPL8673_Y38E10A_26P00065 | ||||||
GPL8673_Y38E10A_26P00069 | ||||||
GPL8673_Y38E10A_26P00117 | ||||||
Expression_cluster (208) | ||||||
Map_info | Map | II | Position | 10.5038 | ||
Positive | Positive_clone | Y38E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |