WormBase Tree Display for Gene: WBGene00012457
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WBGene00012457 | SMap | S_parent | Sequence | Y17G7B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | acbp-6 | Person_evidence | WBPerson344 | |||
WBPerson4367 | |||||||
Sequence_name | Y17G7B.1 | ||||||
Molecular_name | Y17G7B.1 | ||||||
Y17G7B.1.1 | |||||||
CE19034 | |||||||
Other_name | CELE_Y17G7B.1 | Accession_evidence | NDB | BX284602 | |||
Public_name | acbp-6 | ||||||
DB_info | Database | AceView | gene | 2M260 | |||
WormQTL | gene | WBGene00012457 | |||||
WormFlux | gene | WBGene00012457 | |||||
NDB | locus_tag | CELE_Y17G7B.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012457|UniProtKB=Q9XXJ2 | |||||
family | PTHR23310 | ||||||
NCBI | gene | 189453 | |||||
RefSeq | protein | NM_064151.6 | |||||
TREEFAM | TREEFAM_ID | TF320604 | |||||
TrEMBL | UniProtAcc | Q9XXJ2 | |||||
UniProt_GCRP | UniProtAcc | Q9XXJ2 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | acbp | ||||||
Allele (45) | |||||||
Strain | WBStrain00003017 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00104478 | ||||||
00104479 | |||||||
00104480 | |||||||
00119582 | |||||||
Ortholog (25) | |||||||
Paralog | WBGene00001153 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00007680 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00009818 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00016655 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00044603 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018949 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | acbp-6 encodes a highly conserved protein containing a functional acyl-CoA-binding binding domain required for protein stability and ligand binding; loss of ACBP-6 results in 35-40% reduction in lipid chain unsaturation; ACBP-6::GFP is uniquely expressed in specific head, body and tail neurons. | Paper_evidence | WBPaper00038378 | |||
Curator_confirmed | WBPerson12884 | ||||||
Date_last_updated | 13 May 2011 00:00:00 | ||||||
Automated_description | Predicted to enable fatty-acyl-CoA binding activity. Predicted to be involved in fatty acid metabolic process. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y17G7B.1 | |||||
Corresponding_transcript | Y17G7B.1.1 | ||||||
Other_sequence (14) | |||||||
Associated_feature | WBsf650637 | ||||||
WBsf989978 | |||||||
WBsf224018 | |||||||
Experimental_info | RNAi_result | WBRNAi00103582 | Inferred_automatically | RNAi_primary | |||
WBRNAi00061584 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055570 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020079 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036663 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram195 | ||||||
Chronogram803 | |||||||
Expr6897 | |||||||
Expr13624 | |||||||
Expr16303 | |||||||
Expr1012578 | |||||||
Expr1159073 | |||||||
Expr2009118 | |||||||
Expr2027355 | |||||||
Drives_construct | WBCnstr00003515 | ||||||
WBCnstr00003517 | |||||||
WBCnstr00042886 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (113) | |||||||
Interaction | WBInteraction000193464 | ||||||
WBInteraction000300459 | |||||||
WBInteraction000317207 | |||||||
Map_info | Map | II | Position | 5.36273 | Error | 0.101341 | |
Positive | Positive_clone | Y17G7B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00062453 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |