WormBase Tree Display for Gene: WBGene00012443

WBGene00012443 SMap: S_parent: Sequence: Y15E3A
  Identity: Version: 1
    Name: Sequence_name: Y15E3A.4
      Molecular_name: Y15E3A.4
        Y15E3A.4.1
        CE21371
      Other_name: CELE_Y15E3A.4 Accession_evidence: NDB BX284606
      Public_name: Y15E3A.4
    DB_info: Database: AceView gene XP951
        WormQTL gene WBGene00012443
        WormFlux gene WBGene00012443
        NDB locus_tag CELE_Y15E3A.4
        Panther gene CAEEL|WormBase=WBGene00012443|UniProtKB=Q9U2R3
          family PTHR45757
        NCBI gene 181623
        RefSeq protein NM_078138.5
        TREEFAM TREEFAM_ID TF315412
        TrEMBL UniProtAcc Q9U2R3
        UniProt_GCRP UniProtAcc Q9U2R3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (45)
    RNASeq_FPKM (74)
    GO_annotation: 00099543
      00099544
      00099545
      00119566
      00119567
    Ortholog (30)
    Paralog: WBGene00007669 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007947 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008031 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008365 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008647 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008677 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010299 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010646 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010918 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010931 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011185 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011349 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012085 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019187 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00013088 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020698 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020697 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021157 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020700 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019655 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021158 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020157 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020699 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021028 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016003 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020584 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018268 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020906 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015272 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020583 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015271 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018918 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018429 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018920 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001135 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008000 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009811 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010755 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010758 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011556 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011643 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011688 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011717 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011718 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011719 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012130 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015333 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017398 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017681 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017798 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018473 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021219 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021220 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021223 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021226 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022647 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022788 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00302978 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Located in plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y15E3A.4
    Corresponding_transcript: Y15E3A.4.1
    Other_sequence (22)
    Associated_feature: WBsf663634
      WBsf1008186
      WBsf1008187
      WBsf1024570
      WBsf236759
      WBsf236760
      WBsf236761
  Experimental_info: RNAi_result: WBRNAi00036654 Inferred_automatically: RNAi_primary
      WBRNAi00001040 Inferred_automatically: RNAi_primary
      WBRNAi00055553 Inferred_automatically: RNAi_primary
      WBRNAi00020065 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9460
      Expr1024791
      Expr1035508
      Expr1159053
      Expr2007095
      Expr2025323
    Drives_construct: WBCnstr00029950
    Construct_product: WBCnstr00014025
      WBCnstr00029950
    Microarray_results (18)
    Expression_cluster: WBPaper00032976:dosage_compensated_genes
      WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044316:HgCl2_20uM_upregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044743:wdr-23_neuron_upregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045521:Gender_Neutral
      WBPaper00046121:ecdoderm_unique
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00046887:WNT-target
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00049368:daf-2(e1370)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00049942:HeatShock_upregulated_hsf-1(+)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050080:rbr-2(tm3141)_downregulated
      WBPaper00050332:juglone_upregulated
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00051404:alg-2(ok304)_upregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053814:15C_downregulated_PY79
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056034:pals-25(jy9)_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056218:daf-16(mu86)_upregulated_Day3
      WBPaper00056218:daf-16(mu86)_upregulated_Day7
      WBPaper00056284:ints-1(RNAi)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:skn-1(lax188)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:hyp7_C_lineage
      WBPaper00061340:M_cell
      WBPaper00061340:P_cell
      WBPaper00061340:Seam_cell
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:ldb-1_2877-scd-1_3086
      WBPaper00061527:saeg-1_18803-mpz-2_15880
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064005:starvation_upregulated_N2_protein
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064727:daf-2(e1370)_upregulated
      WBPaper00064735:mys-1(RNAi)_vs_N2_upregulated
      WBPaper00064871:hypoxia_downregulated_F2
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065158:AFD_depleted
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065841:5_1
      WBPaper00065841:30_1
      WBPaper00065841:79_0
      WBPaper00065841:79_1
      WBPaper00065841:79_2
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_transcript
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00025032:cluster_140
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00032948:StarveUp1
      WBPaper00034739:N2moreDR1350
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035873:osm-8_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00037695:WC_5-day
      WBPaper00039851:Live_C_albicans_vs_HK_C_albicans
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040823:alg-1(gk214)_upregulated
      WBPaper00040963:Q100_down
      WBPaper00040963:TA300_up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042258:DA1877_upregulated_GravidAdult
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:isp-1(qm150)_downregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00045263:ProLongevity-mtROS_downregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00056330:mrps-5(RNAi)_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc6390]:Cluster_A
    Interaction: WBInteraction000244692
      WBInteraction000413578
      WBInteraction000466600
      WBInteraction000468443
      WBInteraction000468518
      WBInteraction000470042
      WBInteraction000471488
  Map_info: Positive: Positive_clone: Y15E3A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 22.44
  Reference: WBPaper00038444
  Method: Gene