WormBase Tree Display for Gene: WBGene00012143
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WBGene00012143 | SMap | S_parent | Sequence | T28H10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (41) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (24) | ||||||
Paralog | WBGene00003104 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00008260 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00008993 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00016196 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00015794 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012917 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00044557 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in hypodermis; muscle cell; and sensory neurons based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; D-glucose; and Psoralens based on microarray and RNA-seq studies. Human THAP4 enables several functions, including heme binding activity; identical protein binding activity; and peroxynitrite isomerase activity. Is predicted to encode a protein with the following domains: ShK domain-like; Calycin; ShKT domain; THAP4-like, heme-binding beta-barrel domain; and Nitrobindin family. Is an ortholog of human THAP4 (THAP domain containing 4). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T28H10.2 | ||||
Corresponding_CDS_history | T28H10.2:wp175 | |||||
Corresponding_transcript | T28H10.2.1 | |||||
Other_sequence | CJC16163_1 | |||||
Associated_feature | WBsf653227 | |||||
WBsf669512 | ||||||
WBsf234689 | ||||||
WBsf234690 | ||||||
Experimental_info | RNAi_result | WBRNAi00019416 | Inferred_automatically | RNAi_primary | ||
WBRNAi00054447 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00036106 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1027593 | |||||
Expr1157991 | ||||||
Expr2006637 | ||||||
Expr2024854 | ||||||
Drives_construct | WBCnstr00030109 | |||||
Construct_product | WBCnstr00030109 | |||||
Microarray_results (23) | ||||||
Expression_cluster (171) | ||||||
Interaction | WBInteraction000032323 | |||||
WBInteraction000335156 | ||||||
WBInteraction000369055 | ||||||
WBInteraction000369066 | ||||||
WBInteraction000435239 | ||||||
WBInteraction000439234 | ||||||
WBInteraction000467838 | ||||||
WBInteraction000585598 | ||||||
Map_info | Positive | Positive_clone | T28H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | V | 4.43285 | ||||
Reference | WBPaper00031003 | |||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
Method | Gene |