WormBase Tree Display for Gene: WBGene00012117

WBGene00012117 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 1
    Name: Sequence_name: T28B11.1
      Molecular_name: T28B11.1a
        T28B11.1a.1
        CE14335
        T28B11.1b
        CE47990
        T28B11.1a.2
        T28B11.1b.1
      Other_name: CELE_T28B11.1 Accession_evidence: NDB BX284605
      Public_name: T28B11.1
    DB_info: Database: AceView gene 5L194
        WormQTL gene WBGene00012117
        WormFlux gene WBGene00012117
        NDB locus_tag CELE_T28B11.1
        NCBI gene 179487
        RefSeq protein NM_073334.8
            NM_001276928.3
        TrEMBL UniProtAcc K8F7S4
            Q22842
        UniProt_GCRP UniProtAcc Q22842
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01044378
      WBVar01044379
      WBVar01044380
      WBVar01044381
      WBVar01044382
      WBVar01044383
      WBVar01044384
      WBVar01044385
      WBVar01044386
      WBVar00322682
      WBVar01044387
      WBVar02052073
      WBVar01974662
      WBVar01974663
      WBVar01044388
      WBVar01044389
      WBVar01974664
      WBVar01974665
      WBVar01044390
      WBVar01044391
      WBVar01974666
      WBVar01974667
      WBVar01044392
      WBVar01974668
      WBVar01044393
      WBVar02137033
      WBVar01484627
      WBVar01044394
      WBVar02137034
      WBVar01044395
      WBVar01484628
      WBVar02137035
      WBVar01044396
      WBVar02137036
      WBVar01044397
      WBVar01044398
      WBVar01044399
      WBVar01044400
      WBVar01044401
      WBVar00309259
      WBVar01044402
      WBVar01044403
      WBVar01044404
      WBVar01044405
      WBVar01044406
      WBVar01500097
      WBVar01044407
      WBVar01044408
      WBVar01044409
      WBVar01044410
      WBVar01044411
      WBVar01044412
      WBVar01044413
      WBVar01044414
      WBVar01461567
      WBVar01044415
      WBVar00304594
      WBVar01461568
      WBVar01044416
      WBVar01044417
      WBVar01044418
      WBVar01044419
      WBVar01044420
      WBVar01044421
      WBVar01044422
      WBVar01044423
      WBVar01044424
      WBVar01044425
      WBVar01044426
      WBVar01044427
      WBVar01044428
      WBVar01044429
      WBVar01044430
      WBVar01044431
      WBVar01044432
      WBVar01044433
      WBVar01044434
      WBVar01490187
      WBVar01044435
      WBVar00002195
      WBVar00263386
      WBVar01044436
      WBVar01044437
      WBVar01044438
      WBVar00002200
      WBVar01500129
      WBVar01044439
      WBVar02060845
      WBVar01044440
      WBVar01044441
      WBVar02060846
      WBVar00002205
      WBVar01044442
      WBVar02060847
      WBVar01044443
      WBVar02060848
      WBVar00002210
      WBVar02060849
      WBVar01044444
      WBVar02060850
      WBVar01044445
      WBVar00316875
      WBVar02060851
      WBVar01044446
      WBVar01044447
      WBVar00002215
      WBVar00589222
      WBVar00589224
      WBVar01044448
      WBVar01044449
      WBVar00589228
      WBVar00589229
      WBVar01044450
      WBVar00002220
      WBVar00589230
      WBVar01044451
      WBVar01044452
      WBVar01490573
      WBVar01044453
      WBVar00002225
      WBVar00320821
      WBVar01044454
      WBVar01044455
      WBVar01044456
      WBVar00002230
      WBVar01044457
      WBVar01044458
      WBVar01044459
      WBVar00002235
      WBVar01044460
      WBVar01044461
      WBVar01899476
      WBVar01044462
      WBVar00002240
      WBVar01044463
      WBVar01044464
      WBVar00002245
      WBVar01044465
      WBVar01044466
      WBVar01044467
      WBVar00002250
      WBVar01044468
      WBVar01044469
      WBVar02151514
      WBVar00469232
      WBVar01044470
      WBVar00002255
      WBVar01044471
      WBVar00469233
      WBVar01044472
      WBVar00469234
      WBVar01044473
      WBVar00469235
      WBVar01590115
      WBVar00308259
      WBVar00469236
      WBVar01590116
      WBVar01044474
      WBVar00002260
      WBVar01044475
      WBVar00469237
      WBVar01590117
      WBVar01590118
      WBVar00469238
      WBVar01044476
      WBVar00469239
      WBVar00002265
      WBVar01044477
      WBVar00469240
      WBVar01044478
      WBVar01044479
      WBVar00469241
      WBVar00469242
      WBVar01044480
      WBVar01495938
      WBVar01044481
      WBVar01617446
      WBVar00469243
      WBVar01044482
      WBVar00469244
      WBVar01044483
      WBVar00469245
      WBVar01497597
      WBVar01044484
      WBVar00469246
      WBVar01044485
      WBVar01865144
      WBVar00469247
      WBVar01044486
      WBVar01865145
      WBVar00469248
      WBVar01044487
      WBVar00469249
      WBVar01865146
      WBVar01865147
      WBVar01044488
      WBVar00469250
      WBVar01044489
      WBVar00469251
      WBVar01865148
      WBVar00469252
      WBVar01044490
      WBVar01865149
      WBVar00469253
      WBVar01044491
      WBVar01865150
      WBVar01865151
      WBVar00469254
      WBVar01044492
      WBVar01044493
      WBVar00469255
      WBVar01865152
      WBVar01044494
      WBVar01865153
      WBVar00469256
      WBVar01044495
      WBVar01865154
      WBVar00469257
      WBVar01044496
      WBVar01499450
      WBVar01865155
      WBVar00469258
      WBVar00469259
      WBVar01499451
      WBVar01044497
      WBVar01044498
      WBVar00469260
      WBVar00469261
      WBVar01044499
      WBVar00469262
      WBVar01044500
      WBVar00469263
      WBVar01044501
      WBVar00469264
      WBVar01044502
      WBVar00469265
      WBVar01044503
      WBVar01044504
      WBVar00469266
      WBVar00469267
      WBVar01044505
      WBVar00469268
      WBVar01044506
      WBVar01044507
      WBVar00469269
      WBVar00469270
      WBVar01570620
      WBVar01044508
      WBVar01044509
      WBVar00469271
      WBVar00469272
      WBVar01044510
      WBVar00277374
      WBVar01044511
      WBVar00469273
      WBVar00469274
      WBVar01044512
      WBVar00469275
      WBVar01044513
      WBVar00469276
      WBVar01044514
      WBVar01044515
      WBVar00469277
      WBVar01044516
      WBVar00469278
      WBVar00469279
      WBVar01044517
      WBVar01500208
      WBVar01044518
      WBVar00469280
      WBVar01500209
      WBVar00469281
      WBVar01044519
      WBVar00469282
      WBVar01044520
      WBVar00469283
      WBVar00469284
      WBVar00469285
      WBVar00469286
      WBVar00318972
      WBVar00272454
      WBVar00302236
      WBVar01743199
      WBVar01743200
      WBVar01044359
      WBVar01044360
      WBVar01044361
      WBVar01499316
      WBVar01044362
      WBVar01044363
      WBVar01044364
      WBVar01044365
      WBVar01044366
      WBVar01044367
      WBVar01044368
      WBVar01044369
      WBVar01044370
      WBVar01044371
      WBVar01044372
      WBVar01044373
      WBVar01044374
      WBVar01044375
      WBVar01044376
      WBVar01044377
    RNASeq_FPKM (74)
    Ortholog (24)
    Structured_description: Concise_description: T28B11.1 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp1 or with other proteins; about 5% to 15% of T28B11.1 transcripts are RNA edited to change A to G resulting in a change to residue 369 from an K to a E. Paper_evidence: WBPaper00012854
            WBPaper00045975
          Curator_confirmed: WBPerson1843
            WBPerson567
            WBPerson4025
          Date_last_updated: 29 Dec 2014 00:00:00
      Automated_description: Enriched in coelomocyte; germ line; mc3; neurons; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by fifteen chemicals including Cry5B; Zidovudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box-like domain superfamily; and Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T28B11.1a
      T28B11.1b
    Corresponding_transcript: T28B11.1a.1
      T28B11.1a.2
      T28B11.1b.1
    Other_sequence: CRC10724_1
      CRC12102_1
      MC04254
      CSC02370_1
      CR07406
      MC00389
      CRC00865_1
      CBC07350_1
      CR01510
      FD516868.1
    Associated_feature (30)
  Experimental_info: RNAi_result: WBRNAi00019378 Inferred_automatically: RNAi_primary
      WBRNAi00054377 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016789
      Expr1035354
      Expr1157925
      Expr2006596
      Expr2024813
    Microarray_results (24)
    Expression_cluster (190)
    Interaction: WBInteraction000238924
      WBInteraction000246544
      WBInteraction000340564
      WBInteraction000393246
      WBInteraction000461689
      WBInteraction000570159
  Map_info: Positive: Positive_clone: T28B11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 2.74512
  Reference: WBPaper00012854
  Method: Gene