WormBase Tree Display for Variation: WBVar00304594
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WBVar00304594 | Evidence | Paper_evidence | WBPaper00036201 | ||
---|---|---|---|---|---|
Name | Public_name | otn7773 | |||
Other_name | OH7317_281794 | ||||
T28B11.20:n.277C>A | |||||
T28B11.1a.2:c.-50+5203C>A | |||||
HGVSg | CHROMOSOME_V:g.10727137G>T | ||||
Sequence_details | SMap | S_parent | Sequence | T28B11 | |
Flanking_sequences | CAGCCGTCGGAAGCAATGACGTCCAAGGATCGAGCTTCTGCGGTGCGTGC | TGGGAGAATACAAAAACTGAGAAAATTCCGAAAATGGCTCTGAACTGTTG | |||
Mapping_target | T28B11 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00029529 | ||||
Laboratory | OTN | ||||
Analysis | WGS_Hobert | ||||
Status | Live | ||||
Affects | Gene | WBGene00200830 | |||
WBGene00012117 | |||||
Transcript | T28B11.1a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T28B11.1a.2:c.-50+5203C>A | ||||
Intron_number | 1/6 | ||||
T28B11.20 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T28B11.20:n.277C>A | ||||
cDNA_position | 277 | ||||
Exon_number | 1/1 | ||||
Genetics | Map | V | |||
Reference | WBPaper00036201 | ||||
Method | WGS_Hobert |