WormBase Tree Display for Gene: WBGene00011869
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WBGene00011869 | Evidence | Paper_evidence | WBPaper00005976 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T20G5 | ||||
Identity | Version | 2 | |||||
Name | CGC_name | dod-6 | Person_evidence | WBPerson1157 | |||
Sequence_name | T20G5.7 | ||||||
Molecular_name | T20G5.7 | ||||||
T20G5.7.1 | |||||||
CE00587 | |||||||
Other_name | CELE_T20G5.7 | Accession_evidence | NDB | BX284603 | |||
Public_name | dod-6 | ||||||
DB_info | Database | AceView | gene | 3L287 | |||
WormQTL | gene | WBGene00011869 | |||||
WormFlux | gene | WBGene00011869 | |||||
NDB | locus_tag | CELE_T20G5.7 | |||||
NCBI | gene | 176433 | |||||
RefSeq | protein | NM_066856.8 | |||||
TrEMBL | UniProtAcc | Q22613 | |||||
UniProt_GCRP | UniProtAcc | Q22613 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dod | ||||||
Allele (13) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00075795 | ||||||
Ortholog | WBGene00031323 | Caenorhabditis briggsae | From_analysis | OMA | |||
WormBase-Compara | |||||||
WBGene00142088 | Caenorhabditis brenneri | From_analysis | OMA | ||||
WormBase-Compara | |||||||
WBGene00085206 | Caenorhabditis remanei | From_analysis | OMA | ||||
WBGene00085211 | Caenorhabditis remanei | From_analysis | OMA | ||||
WBGene00193272 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WormBase-Compara | |||||||
WBGene00087292 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||
CSP31.g20309 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||
Sp34_30209210 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00011870 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T20G5.7 | |||||
Corresponding_transcript | T20G5.7.1 | ||||||
Other_sequence | FD517664.1 | ||||||
CRC06793_1 | |||||||
FD514181.1 | |||||||
CBC14050_1 | |||||||
CBC03828_1 | |||||||
CR04490 | |||||||
CSC01566_1 | |||||||
FD515453.1 | |||||||
Associated_feature | WBsf019176 | ||||||
WBsf645545 | |||||||
WBsf645546 | |||||||
WBsf993931 | |||||||
WBsf1015747 | |||||||
WBsf225679 | |||||||
WBsf225680 | |||||||
Experimental_info | RNAi_result | WBRNAi00035724 | Inferred_automatically | RNAi_primary | |||
WBRNAi00053666 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006370 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00063166 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018931 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00063165 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1011253 | ||||||
Expr1035230 | |||||||
Expr1157221 | |||||||
Expr2011022 | |||||||
Expr2029259 | |||||||
Drives_construct | WBCnstr00030322 | ||||||
Construct_product | WBCnstr00030322 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (269) | |||||||
Interaction | WBInteraction000030911 | ||||||
WBInteraction000349708 | |||||||
WBInteraction000385304 | |||||||
WBInteraction000449381 | |||||||
WBInteraction000519436 | |||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Map | III | Position | 2.00823 | Error | 0.001644 | |
Positive | Positive_clone | T20G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005976 | ||||||
WBPaper00031482 | |||||||
WBPaper00032277 | |||||||
WBPaper00042367 | |||||||
WBPaper00044217 | |||||||
WBPaper00051227 | |||||||
WBPaper00061133 | |||||||
WBPaper00062392 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |