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WormBase Tree Display for Gene: WBGene00011850

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Name Class

WBGene00011850SMapS_parentSequenceT20B3
IdentityVersion1
NameSequence_nameT20B3.1
Molecular_nameT20B3.1a
T20B3.1a.1
CE20086
T20B3.1b
CE53020
T20B3.1b.1
Other_nameCELE_T20B3.1Accession_evidenceNDBBX284605
Public_nameT20B3.1
DB_infoDatabaseAceViewgene5R299
WormQTLgeneWBGene00011850
WormFluxgeneWBGene00011850
NDBlocus_tagCELE_T20B3.1
PanthergeneCAEEL|WormBase=WBGene00011850|UniProtKB=Q9XUN8
familyPTHR22589
NCBIgene180126
RefSeqproteinNM_001373175.2
NM_074844.6
TrEMBLUniProtAccQ9XUN8
A0A486WVT5
UniProt_GCRPUniProtAccA0A486WVT5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (148)
RNASeq_FPKM (74)
GO_annotation00003596
00003597
00003598
00119079
OrthologWBGene00042135Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00056521Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00142789Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122623Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00103700Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
CBOVI.g2050Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1999Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7641Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7152Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19268Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26925Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6085Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g773Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1796Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22135Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24029Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00253.g7942Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00253.g7944Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-T20B3.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold408.g969Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01019.g17647Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02849Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019819Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00160Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_50375800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g17264Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0039543Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050522-35Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:2366Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1921364Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:70908Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00000481Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007175Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008629Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009622Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011122Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019644Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020911Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021703Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021002Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012907Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carnitine O-octanoyltransferase activity. Predicted to be located in peroxisome. Is an ortholog of human CROT (carnitine O-octanoyltransferase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST20B3.1a
T20B3.1b
Corresponding_transcriptT20B3.1a.1
T20B3.1b.1
Other_sequence (13)
Associated_featureWBsf1002537
WBsf1002538
WBsf1021191
Experimental_infoRNAi_resultWBRNAi00087507Inferred_automaticallyRNAi_primary
WBRNAi00018882Inferred_automaticallyRNAi_primary
WBRNAi00102598Inferred_automaticallyRNAi_primary
WBRNAi00053592Inferred_automaticallyRNAi_primary
WBRNAi00035690Inferred_automaticallyRNAi_primary
Expr_patternExpr1023021
Expr1035221
Expr1157149
Expr2006280
Expr2024497
Microarray_results (20)
Expression_cluster (206)
InteractionWBInteraction000049246
WBInteraction000145425
WBInteraction000177869
WBInteraction000196223
WBInteraction000238760
WBInteraction000254288
WBInteraction000360052
WBInteraction000519259
WBInteraction000557879
Map_infoPositivePositive_cloneT20B3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV11.1943
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00054451
WBPaper00055090
WBPaper00062625
MethodGene