Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00011802

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00011802SMapS_parentSequenceT16G1
IdentityVersion1
NameSequence_nameT16G1.9
Molecular_nameT16G1.9
T16G1.9.1
CE20079
T16G1.9.2
Other_nameCELE_T16G1.9Accession_evidenceNDBBX284605
Public_nameT16G1.9
DB_infoDatabaseAceViewgene5N428
WormQTLgeneWBGene00011802
WormFluxgeneWBGene00011802
NDBlocus_tagCELE_T16G1.9
PanthergeneCAEEL|WormBase=WBGene00011802|UniProtKB=Q9U367
familyPTHR24203
NCBIgene179778
RefSeqproteinNM_073838.5
TREEFAMTREEFAM_IDTF316391
TrEMBLUniProtAccQ9U367
UniProt_GCRPUniProtAccQ9U367
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (51)
StrainWBStrain00037366
RNASeq_FPKM (74)
GO_annotation00100002
Ortholog (34)
Structured_descriptionAutomated_descriptionEnriched in head mesodermal cell; intestine; mechanosensory neurons; rectal epithelial cell; and terminal bulb based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and hsf-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by four chemicals including Chlorpyrifos; Diazinon; and Humic Substances based on microarray studies. Is predicted to encode a protein with the following domains: Ankyrin repeats (3 copies); Ankyrin repeat; Beta-hexosaminidase-like, domain 2; Ankyrin repeat-containing domain superfamily; and Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST16G1.9
Corresponding_transcriptT16G1.9.1
T16G1.9.2
Other_sequence (44)
Associated_featureWBsf669536
WBsf234749
WBsf234750
Experimental_infoRNAi_resultWBRNAi00018774Inferred_automaticallyRNAi_primary
WBRNAi00000592Inferred_automaticallyRNAi_primary
WBRNAi00035616Inferred_automaticallyRNAi_primary
WBRNAi00053419Inferred_automaticallyRNAi_primary
WBRNAi00108529Inferred_automaticallyRNAi_primary
WBRNAi00018775Inferred_automaticallyRNAi_primary
Expr_patternExpr1027621
Expr1035195
Expr1156994
Expr2006212
Expr2024430
Drives_constructWBCnstr00030375
Construct_productWBCnstr00030375
Microarray_results (19)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050094:mes-2(bn11)_upregulated
WBPaper00050094:mes-6(bn66)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:nucleus_specific
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_embryo_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00057136:yap-1(ys38)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059605:MUT-16_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059987:Wounding_downregulated
WBPaper00061340:F_U
WBPaper00061340:g1A_g1P
WBPaper00061340:K_Kprime
WBPaper00061340:mc3
WBPaper00061527:uggt-1_21889-tag-320_20312
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062554:MAGU-2_interacting
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064130:Beta-Amyloid_upregulated_protein
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
cgc4489_group_16
cgc4489_group_24
WBPaper00005475:Aging-regulated
WBPaper00025032:cluster_156
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00032948:FedUp
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_G
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00047070:N2_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_B
Interaction (28)
Map_infoPositivePositive_cloneT16G1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV4.74442
ReferenceWBPaper00061547
MethodGene