WormBase Tree Display for Gene: WBGene00011267

WBGene00011267 SMap: S_parent: Sequence: R17
  Identity: Version: 2
    Name: CGC_name: fbxb-85 Person_evidence: WBPerson655
      Sequence_name: R17.1
      Molecular_name: R17.1
        R17.1.1
        CE16314
      Other_name: CELE_R17.1 Accession_evidence: NDB BX284603
      Public_name: fbxb-85
    DB_info: Database: AceView gene 3L936
        WormQTL gene WBGene00011267
        WormFlux gene WBGene00011267
        NDB locus_tag CELE_R17.1
        Panther gene CAEEL|WormBase=WBGene00011267|UniProtKB=O18004
          family PTHR22899
        NCBI gene 187876
        RefSeq protein NM_066988.3
        TrEMBL UniProtAcc O18004
        UniProt_GCRP UniProtAcc O18004
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-85
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (24)
    RNASeq_FPKM (74)
    Ortholog (47)
    Paralog (144)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABplaapaaa; ABplapaaaap; ABplapaaapa; AVA; and NSM based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by eleven chemicals including Mercuric Chloride; rotenone; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R17.1
    Corresponding_transcript: R17.1.1
    Associated_feature: WBsf651488
      WBsf655482
      WBsf227529
      WBsf227530
      WBsf227531
      WBsf227532
  Experimental_info: RNAi_result: WBRNAi00034951 Inferred_automatically: RNAi_primary
      WBRNAi00006324 Inferred_automatically: RNAi_primary
      WBRNAi00052002 Inferred_automatically: RNAi_primary
      WBRNAi00017886 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025146
      Expr1034946
      Expr1155644
      Expr2011686
      Expr2029925
    Microarray_results (17)
    Expression_cluster (113)
    Interaction (41)
  Map_info: Map: III Position: 5.42989 Error: 0.006803
    Positive: Positive_clone: R17 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene