WormBase Tree Display for CDS: R17.1
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| R17.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R17 | |||
| Structure | Source_exons | 1 | 77 | |||
| 140 | 923 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O18004 | ||
| UniProt | UniProtAcc | O18004 | ||||
| UniProt_GCRP | UniProtAcc | O18004 | ||||
| AlphaFold | entry | O18004 | ||||
| NCBI_protein | GI_number | GI:3879186 | ||||
| Protein_id | CHROMOSOME_III | CAB07270 | 1 | |||
| DB_remark | FBXB-85 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF07735 (F-box associated); contains similarity to Interpro domains IPR012885 (F-box associated domain, type 2), IPR001810 (F-box domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011267 | ||||
| Corresponding_transcript | R17.1.1 | |||||
| Corresponding_protein | CE16314 | |||||
| Corresponding_PCR_product | TH:324G11 | |||||
| cenix:324-g11 | ||||||
| mv_R17.1 | ||||||
| sjj_R17.1 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | male_Nanopore_Roach_107707 | Inferred_automatically | transcript_builder.pl | |||
| FM247271 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_111069 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00034951 | |||||
| WBRNAi00006324 | ||||||
| WBRNAi00052002 | ||||||
| WBRNAi00017886 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:O18004 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
