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WormBase Tree Display for Gene: WBGene00011090

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Name Class

WBGene00011090SMapS_parentSequenceR07B7
IdentityVersion1
NameSequence_nameR07B7.6
Molecular_nameR07B7.6a
R07B7.6a.1
CE37399
R07B7.6b
CE47604
R07B7.6b.1
Other_nameCELE_R07B7.6Accession_evidenceNDBBX284605
Public_nameR07B7.6
DB_infoDatabaseAceViewgene5M554
WormQTLgeneWBGene00011090
SignaLinkproteinWBGene00011090
WormFluxgeneWBGene00011090
NDBlocus_tagCELE_R07B7.6
PanthergeneCAEEL|WormBase=WBGene00011090|UniProtKB=Q21796
familyPTHR46671
NCBIgene179658
RefSeqproteinNM_001269471.3
NM_001269470.4
TrEMBLUniProtAccI2HA85
Q21796
UniProt_GCRPUniProtAccQ21796
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (34)
RNASeq_FPKM (74)
GO_annotation00023809
00023810
00023811
00023812
00023813
00023814
00118374
00118375
Ortholog (57)
Paralog (19)
Structured_descriptionAutomated_descriptionPredicted to enable glycosyltransferase activity. Predicted to be located in Golgi membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR07B7.6a
R07B7.6b
Corresponding_CDS_historyR07B7.6:wp131
Corresponding_transcriptR07B7.6a.1
R07B7.6b.1
Other_sequenceCJC17984_1
Associated_featureWBsf717263
WBsf718418
WBsf1001516
WBsf234619
Experimental_infoRNAi_resultWBRNAi00017524Inferred_automaticallyRNAi_primary
WBRNAi00051440Inferred_automaticallyRNAi_primary
WBRNAi00051441Inferred_automaticallyRNAi_primary
WBRNAi00051439Inferred_automaticallyRNAi_primary
Expr_patternExpr1011061
Expr1034869
Expr1155127
Expr2005448
Expr2023669
Drives_constructWBCnstr00030941
Construct_productWBCnstr00030941
Microarray_results (24)
Expression_clusterWBPaper00031040:Cluster_3
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00040420:FLP_enriched
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045571:germline-ablation_upregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:daf-2(e1370)_downregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049334:CE_intestine_enriched
WBPaper00049498:npr-1(ur89)_regulated_7
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051305:vit-2(ac3)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056073:R24_upregulated_nhr-86_dependent
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:ADF
WBPaper00061340:ASG
WBPaper00061340:g1A
WBPaper00061340:g1P
WBPaper00061340:Rectal_gland
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:F58F9.3_11574-R07B7.6
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062590:Aging_upregulated_intestine
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064871:PA14_upregulated_AWA
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:30_0
WBPaper00065841:41_0
WBPaper00065841:41_1
WBPaper00065841:41_2
WBPaper00065841:43_0
WBPaper00065841:45_0
WBPaper00065841:70_1
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_22
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00026980:intestine_enriched
WBPaper00028789:PA14_vs_OP50_upregulated_4hr
WBPaper00029437:dcr-1_upregulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035588:alg-1(-)_upregulated
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
WBPaper00045673:colistin_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc6390]:Cluster_A
InteractionWBInteraction000304683
WBInteraction000322687
WBInteraction000322981
WBInteraction000440270
WBInteraction000566447
WBInteraction000566726
Map_infoPositivePositive_cloneR07B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV3.62487
ReferenceWBPaper00029024
WBPaper00038491
WBPaper00055090
MethodGene